RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ZNF883P0CG24 379 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 HLA-EP13747 358 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 JUNBP17275 347 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 GABRG2P18507 467 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 HDCP19113 662 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 MUTP22033 750 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 EIF2DP41214 584 aaKnown RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 ZXDBP98169 803 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 MCL1Q07820 350 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 BNIP3Q12983 259 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 DHCR24Q15392 516 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 DDR2Q16832 855 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 ZC2HC1CQ53FD0 456 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 WDR45BQ5MNZ6 344 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 SYCP2LQ5T4T6 812 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 SDHAF4Q5VUM1 108 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 SPATA1Q5VX52 437 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 PCSK4Q6UW60 755 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 GPR155Q7Z3F1 870 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 METTL23Q86XA0 190 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 SMYD4Q8IYR2 804 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 DCP1BQ8IZD4 617 aaKnown RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 POU5F2Q8N7G0 328 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 KIAA1958Q8N8K9 716 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 ERMNQ8TAM6 284 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 TRMT2BQ96GJ1 504 aaKnown RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 HSPA12BQ96MM6 686 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 FCRL3Q96P31 734 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 TSPAN18Q96SJ8 248 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 NTPCRQ9BSD7 190 aaKnown RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 TMEM60Q9H2L4 133 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 BHMT2Q9H2M3 363 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 IL21RQ9HBE5 538 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 ZDHHC4Q9NPG8 344 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 KMT5AQ9NQR1 393 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 CALCOCO1Q9P1Z2 691 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 ARHGAP26Q9UNA1 814 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 PCDHB5Q9Y5E4 795 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 PTPRDP23468 1912 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 ARID2Q68CP9 1835 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 A0A1B0GTW7 788 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 C2orf78A6NCI8 922 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 SOWAHDA6NJG2 315 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-224ENST00000554040 LEFTY2O00292 366 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 PLK4O00444 970 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 CYB561D2O14569 222 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 RRP8O43159 456 aaKnown RBP7.34□□□□□ -1.23
ATXN3-224ENST00000554040 CDKL5O76039 1030 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 CYP17A1P05093 508 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 ADRB2P07550 413 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 SLFN14P0C7P3 912 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 KRT2P35908 639 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 STK3Q13188 491 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 KCNB1Q14721 858 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 KYAT1Q16773 422 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 CYP27C1Q4G0S4 372 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 C9orf57Q5W0N0 161 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 RHBDF2Q6PJF5 856 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 IL27RAQ6UWB1 636 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 ZPBP2Q6X784 338 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 DTHD1Q6ZMT9 781 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 TRMT11Q7Z4G4 463 aaKnown RBP7.34□□□□□ -1.23
ATXN3-224ENST00000554040 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 TMPRSS12Q86WS5 348 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 DAW1Q8N136 415 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 FSIP1Q8NA03 581 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 STKLD1Q8NE28 680 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 DNASE2BQ8WZ79 361 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 HAPLN2Q9GZV7 340 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 GAREM1Q9H706 876 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 C17orf75Q9HAS0 396 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 ARHGEF4Q9NR80 690 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 TM7SF3Q9NS93 570 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 TMLHEQ9NVH6 421 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 CYP8B1Q9UNU6 501 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 PCDHGB2Q9Y5G2 931 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 ATMQ13315 3056 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 ADAMTS9Q9P2N4 1935 aa7.34□□□□□ -1.23
ATXN3-224ENST00000554040 PTPRBP23467 1997 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 SPTAN1Q13813 2472 aaKnown RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 AHCTF1Q8WYP5 2266 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 A0A1W2PQF6 199 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 ANO9A1A5B4 782 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 TBC1D3BA6NDS4 549 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 SLC9A3R1O14745 358 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 SLC16A4O15374 487 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 FLRT2O43155 660 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 TNFSF14O43557 240 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 TLX3O43711 291 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-224ENST00000554040 HIP1RO75146 1068 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 NDUFS2O75306 463 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 CILPO75339 1184 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 CER1O95813 267 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 PFKLP17858 780 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 CYP2F1P24903 491 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 TNFSF9P41273 254 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 PDE6CP51160 858 aa7.33□□□□□ -1.24
ATXN3-224ENST00000554040 RPL10AP62906 217 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms