RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 DHRS4Q9BTZ2 278 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 DNAAF2Q9NVR5 837 aaKnown RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 TMCO1Q9UM00 188 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 CDY2AQ9Y6F7 541 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 CDY1Q9Y6F8 540 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 SDR42E2A6NKP2 422 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 OGTO15294 1046 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 ABCD1P33897 745 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 ARL4AP40617 200 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 ABCE1P61221 599 aaKnown RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 IL31Q6EBC2 164 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 KCNT2Q6UVM3 1135 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 KYAT3Q6YP21 454 aaKnown RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 SCUBE3Q8IX30 993 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 PLD5Q8N7P1 536 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 IFT43Q96FT9 208 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 APOL2Q9BQE5 337 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 HAPLN2Q9GZV7 340 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 COG4Q9H9E3 785 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 POPDC2Q9HBU9 364 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 SIRPGQ9P1W8 387 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 NHSL1Q5SYE7 1610 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 KLF11O14901 512 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 STRNO43815 780 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 GPC4O75487 556 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 TNFAIP8O95379 198 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 METTL18O95568 372 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 TSHRP16473 764 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 PSMC3P17980 439 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 VPS72Q15906 364 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 ARCQ7LC44 396 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 ARFGAP1Q8N6T3 406 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 TDRD5Q8NAT2 981 aaKnown RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 LIN28AQ9H9Z2 209 aaKnown RBP11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 SLC38A10Q9HBR0 1119 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 TMEM216Q9P0N5 145 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 DCDC2Q9UHG0 476 aa11.92□□□□□ -0.5
PPFIA2-227ENST00000552948 KPNA7A9QM74 516 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 SUPT20HL2P0C7V6 817 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 PABPC4LP0CB38 370 aaKnown RBP11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GRK2P25098 689 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 MAP3K10Q02779 954 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GBE1Q04446 702 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 KLF10Q13118 480 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GEN1Q17RS7 908 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 SUPT20HL1Q3ZLR7 823 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 XYLT1Q86Y38 959 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 KYQ8NBH2 561 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GPRASP2Q96D09 838 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 TASP1Q9H6P5 420 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GTSE1Q9NYZ3 720 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 KLHL8Q9P2G9 620 aaPredicted RBP11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GNEQ9Y223 722 aaKnown RBP11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 SNX13Q9Y5W8 968 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 TPST1O60507 370 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 ASLP04424 464 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 THRAP10827 490 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 ITGAXP20702 1163 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 CYP2F1P24903 491 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 STAT5BP51692 787 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 AP3M2P53677 418 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 ESRRGP62508 458 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 KCTD21Q4G0X4 260 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 TMEM259Q4ZIN3 620 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 BOLA3Q53S33 107 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 TEDDM1Q5T9Z0 273 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 KLHDC10Q6PID8 442 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 ADGRF2Q8IZF7 708 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 FRMD8Q9BZ67 464 aaPredicted RBP11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 ZNF277Q9NRM2 450 aaPredicted RBP11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 CNTN3Q9P232 1028 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 SORCS3Q9UPU3 1222 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 EFR3BQ9Y2G0 817 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 MAST2Q6P0Q8 1798 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 AMHP03971 560 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GJB1P08034 283 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 AOC1P19801 751 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 PTGER2P43116 358 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 GABRB2P47870 512 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 C16orf72Q14CZ0 275 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 TLR1Q15399 786 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 C16orf89Q6UX73 402 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 RDM1Q8NG50 284 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 RCN3Q96D15 328 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 PORCNQ9H237 461 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 SLC39A10Q9ULF5 831 aa11.91□□□□□ -0.5
PPFIA2-227ENST00000552948 BIRC5O15392 142 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 PLIN3O60664 434 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 MT-CO1P00395 513 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 LCP1P13796 627 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 AVPR1AP37288 418 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 GRIA2P42262 883 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 SERPINB8P50452 374 aa11.9□□□□□ -0.5
PPFIA2-227ENST00000552948 HMGCS2P54868 508 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms