RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 DBX2Q6ZNG2 339 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 C4orf50Q6ZRC1 276 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 DENND5BQ6ZUT9 1274 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 TMPRSS12Q86WS5 348 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 DDX42Q86XP3 938 aaKnown RBP eCLIP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 TMEM25Q86YD3 366 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 BBS7Q8IWZ6 715 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 ADGRF2Q8IZF7 708 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 KIAA1958Q8N8K9 716 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 IGSF22Q8N9C0 903 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SNX19Q92543 992 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 GTF3C6Q969F1 213 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 MYLPFQ96A32 169 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 FUBP3Q96I24 572 aaKnown RBP eCLIP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SPATA17Q96L03 361 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 CALR3Q96L12 384 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SYT15Q9BQS2 421 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 MMTAG2Q9BU76 263 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 RAB34Q9BZG1 259 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SEMA4CQ9C0C4 833 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 DNAJC17Q9NVM6 304 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 WSB2Q9NYS7 404 aaPredicted RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 GMIPQ9P107 970 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 LARSQ9P2J5 1176 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 TBC1D14Q9P2M4 693 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 MAGEC2Q9UBF1 373 aaPredicted RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
HOXB3-213ENST00000552000 AGAP1Q9UPQ3 857 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 PCDHB6Q9Y5E3 794 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 SLCO1B1Q9Y6L6 691 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 NAV3Q8IVL0 2385 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 MTORP42345 2549 aa5.71□□□□□ -1.5
HOXB3-213ENST00000552000 UNC13CQ8NB66 2214 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 E2F8A0AVK6 867 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 METTL12A8MUP2 240 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 KCNJ18B7U540 433 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 PRRT4C9JH25 899 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 F8VP50 259 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 OAS1P00973 400 aaKnown RBP5.7□□□□□ -1.5
HOXB3-213ENST00000552000 ITGB3P05106 788 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 PDGFRBP09619 1106 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 PLA2G4BP0C869 781 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 IRF1P10914 325 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 PLCG1P19174 1290 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 ANXA13P27216 316 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 HNF1BP35680 557 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 GRK6P43250 576 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 LHX1P48742 406 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SLC12A3P55017 1021 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 TFAMQ00059 246 aaKnown RBP5.7□□□□□ -1.5
HOXB3-213ENST00000552000 IL9RQ01113 521 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 TLE3Q04726 772 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 TAF10Q12962 218 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SF3A1Q15459 793 aaKnown RBP5.7□□□□□ -1.5
HOXB3-213ENST00000552000 IL17AQ16552 155 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 ME3Q16798 604 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 PREPLQ4J6C6 727 aaPredicted RBP5.7□□□□□ -1.5
HOXB3-213ENST00000552000 ARSHQ5FYA8 562 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 FAM171BQ6P995 826 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 LAYNQ6UX15 382 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 VSTM1Q6UX27 236 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 CACUL1Q86Y37 369 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 TMEM86AQ8N2M4 240 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 MYCT1Q8N699 235 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 C1orf127Q8N9H9 656 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SYT2Q8N9I0 419 aaPredicted RBP5.7□□□□□ -1.5
HOXB3-213ENST00000552000 FAM181AQ8N9Y4 354 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SCFD1Q8WVM8 642 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 WBP2Q969T9 261 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 OTUB2Q96DC9 234 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SLC30A3Q99726 388 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 GABRG3Q99928 467 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 REEP2Q9BRK0 252 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 TTLL2Q9BWV7 592 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 TRIM9Q9C026 710 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 CRTAC1Q9NQ79 661 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SPHK2Q9NRA0 654 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 FTSJ1Q9UET6 329 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 AGO2Q9UKV8 859 aaKnown RBP5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SH3BP1Q9Y3L3 701 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 NFE2L3Q9Y4A8 694 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SNX11Q9Y5W9 270 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 SNX9Q9Y5X1 595 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 LRBAP50851 2863 aa5.7□□□□□ -1.5
HOXB3-213ENST00000552000 BSNQ9UPA5 3926 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 B8ZZF3 427 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 NEDD8-MDP1E9PL57 170 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 H0Y8X5 98 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 CBX4O00257 560 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 BRINP1O60477 761 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 FAM13AO94988 1023 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 IL18RAPO95256 599 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 WISP1O95388 367 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 KRT19P08727 400 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 KRT10P13645 584 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 LMO2P25791 158 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 PPP3CCP48454 512 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 TRAPPC10P48553 1259 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 CCT8P50990 548 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 TPMTP51580 245 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms