RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PCDH17O14917 1159 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 RECQL4O94761 1208 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 LDHCP07864 332 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 ARP10275 920 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 JUPP14923 745 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 NPTX2P47972 431 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 RBM5P52756 815 aaKnown RBP eCLIP5.97□□□□□ -1.45
CPSF6-206ENST00000550987 MC2RQ01718 297 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 TUBB3Q13509 450 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 DYRK1AQ13627 763 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 PDE1CQ14123 709 aaPredicted RBP5.97□□□□□ -1.45
CPSF6-206ENST00000550987 CSHL1Q14406 222 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 ZNF569Q5MCW4 686 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 RBM20Q5T481 1227 aaKnown RBP5.97□□□□□ -1.45
CPSF6-206ENST00000550987 CERCAMQ5T4B2 595 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 VPS53Q5VIR6 699 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 ICE2Q659A1 982 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 C4orf50Q6ZRC1 276 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 RINLQ6ZS11 566 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 CPOQ8IVL8 374 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 MAPKAPK5Q8IW41 473 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 SP8Q8IXZ3 490 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 FUKQ8N0W3 1084 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 SYNE4Q8N205 404 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 SIMC1Q8NDZ2 872 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 SNX19Q92543 992 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 EIF3CQ99613 913 aaKnown RBP5.97□□□□□ -1.45
CPSF6-206ENST00000550987 UNKLQ9H9P5 680 aaKnown RBP5.97□□□□□ -1.45
CPSF6-206ENST00000550987 JMJD4Q9H9V9 463 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 VSX1Q9NZR4 365 aaPredicted RBP5.97□□□□□ -1.45
CPSF6-206ENST00000550987 SERTAD3Q9UJW9 196 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 DAPP1Q9UN19 280 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 ASPMQ8IZT6 3477 aa5.97□□□□□ -1.45
CPSF6-206ENST00000550987 MAP1BP46821 2468 aaKnown RBP5.97□□□□□ -1.45
CPSF6-206ENST00000550987 CCDC196A0A1B0GTZ2 297 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 MYADML2A6NDP7 307 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 TISP43B9A030 160 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 SMIM22K7EJ46 135 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 ZNF185O15231 689 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 CYP27B1O15528 508 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 CD4P01730 458 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 TK1P04183 234 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 EPHA3P29320 983 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 PPIFP30405 207 aaKnown RBP5.96□□□□□ -1.46
CPSF6-206ENST00000550987 UQCRC1P31930 480 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 TUBP50607 506 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 DEPDC1Q5TB30 811 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 TCTN3Q6NUS6 607 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 MICALCLQ6ZW33 695 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 POLNQ7Z5Q5 900 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 C11orf44Q8N8P7 122 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 PCYOX1LQ8NBM8 494 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 OSCP1Q8WVF1 389 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 HMGB4Q8WW32 186 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 HTRA1Q92743 480 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 TMEM125Q96AQ2 219 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 ZDHHC12Q96GR4 267 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 TTPALQ9BTX7 342 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 INO80BQ9C086 356 aaPredicted RBP5.96□□□□□ -1.46
CPSF6-206ENST00000550987 MEGF9Q9H1U4 602 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 VPS16Q9H269 839 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 TRPM5Q9NZQ8 1165 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 NDUFAF4Q9P032 175 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 ARHGAP26Q9UNA1 814 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 SORCS3Q9UPU3 1222 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 NOX1Q9Y5S8 564 aa5.96□□□□□ -1.46
CPSF6-206ENST00000550987 INSRP06213 1382 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 COL4A5P29400 1685 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 PRAMEF33A0A0G2JMD5 474 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 PRAMEF10O60809 474 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 RPS6KA4O75676 772 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 SCAF4O95104 1147 aaKnown RBP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 C4AP0C0L4 1744 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 FAM163BP0C2L3 166 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 ATP1A3P13637 1013 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 ADORA2AP29274 412 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 HIBADHP31937 336 aaKnown RBP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 CNR2P34972 360 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 MAN2A2P49641 1150 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 PDE6CP51160 858 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 EIF5P55010 431 aaKnown RBP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 CRHR2Q13324 411 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 HLXQ14774 488 aaPredicted RBP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 ANKRD1Q15327 319 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 PDCD4Q53EL6 469 aaKnown RBP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 METRNLQ641Q3 311 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 GLB1LQ6UWU2 654 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 UBR3Q6ZT12 1888 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 SYT13Q7L8C5 426 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 Q8N3U1 123 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 USP38Q8NB14 1042 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 MBD3L2Q8NHZ7 208 aaPredicted RBP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 HERVK_113Q902F9 699 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 RNF31Q96EP0 1072 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 NEU1Q99519 415 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 HNRNPABQ99729 332 aaKnown RBP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 NUDT22Q9BRQ3 303 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 RASSF1Q9NS23 344 aa5.95□□□□□ -1.46
CPSF6-206ENST00000550987 BCCIPQ9P287 314 aaKnown RBP eCLIP5.95□□□□□ -1.46
CPSF6-206ENST00000550987 BAG5Q9UL15 447 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms