RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZBTB10Q96DT7 871 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 MYEOVQ96EZ4 313 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 AIFM3Q96NN9 605 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 NEK1Q96PY6 1258 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 ADI1Q9BV57 179 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 LDAHQ9H6V9 325 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 AKIP1Q9NQ31 210 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 ISY1Q9ULR0 285 aaKnown RBP5.54□□□□□ -1.52
SCAF11-214ENST00000550893 UBIAD1Q9Y5Z9 338 aa5.54□□□□□ -1.52
SCAF11-214ENST00000550893 KLF18A0A0U1RQI7 1052 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 TMEM191CA6NGB0 347 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 DRGXA6NNA5 263 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 RAMP2O60895 175 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 NBNO60934 754 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 PPFIA4O75335 1185 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 CCNE2O96020 404 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 TXNP10599 105 aaKnown RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 CHN2P52757 468 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 RCAN1P53805 252 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 SP140Q13342 867 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 KLF1Q13351 362 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 PTPAQ15257 358 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 CELF3Q5SZQ8 465 aaKnown RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 ATXN7L2Q5T6C5 722 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 FAM102AQ5T9C2 384 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 AFMIDQ63HM1 303 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 SEPT14Q6ZU15 432 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 CNTD1Q8N815 330 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 FANCBQ8NB91 859 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 OR6J1Q8NGC5 347 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 PPTC7Q8NI37 304 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 NSUN6Q8TEA1 469 aaKnown RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 NUP133Q8WUM0 1156 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 JAKMIP1Q96N16 626 aaKnown RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 IWS1Q96ST2 819 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 AGAP2Q99490 1192 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 NEU1Q99519 415 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 GJB4Q9NTQ9 266 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 ADD3Q9UEY8 706 aaKnown RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 SIK3Q9Y2K2 1263 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 ATP8A1Q9Y2Q0 1164 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 MRPL11Q9Y3B7 192 aaKnown RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 DMRT1Q9Y5R6 373 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 GPR45Q9Y5Y3 372 aa5.53□□□□□ -1.52
SCAF11-214ENST00000550893 TCF20Q9UGU0 1960 aaKnown RBP5.53□□□□□ -1.52
SCAF11-214ENST00000550893 GSTTP1A0A1W2PQM5 241 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 TMEM200CA6NKL6 621 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 FAM86B1E9PN63 330 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 OVOL3O00110 214 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 EIF3JO75822 258 aaKnown RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 NDUFA10O95299 355 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 GGPS1O95749 300 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 CXCL10P02778 98 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 LGALS2P05162 132 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 MYL3P08590 195 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 FAM86B2P0C5J1 330 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 MYOGP15173 224 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 AGXTP21549 392 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 PDIA3P30101 505 aaKnown RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 CCL23P55773 120 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 RAP2BP61225 183 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 FPGSQ05932 587 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 EARS2Q5JPH6 523 aaKnown RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 MARCH8Q5T0T0 291 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 NFRKBQ6P4R8 1299 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 B3GNT9Q6UX72 402 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 ZNF365Q70YC5 407 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 TMCO2Q7Z6W1 182 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 CATIPQ7Z7H3 387 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 PLXDC1Q8IUK5 500 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 PCSK9Q8NBP7 692 aaKnown RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 OR2I1PQ8NGU4 316 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 HERVK_113Q902F9 699 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 PHKBQ93100 1093 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 CCDC136Q96JN2 1154 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 GLT1D1Q96MS3 346 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 MTG1Q9BT17 334 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 MRI1Q9BV20 369 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 UPF3BQ9BZI7 483 aaKnown RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 LANCL2Q9NS86 450 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 BARHL2Q9NY43 387 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 HDAC6Q9UBN7 1215 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 DKK2Q9UBU2 259 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 DNM3Q9UQ16 869 aa5.52□□□□□ -1.53
SCAF11-214ENST00000550893 USP15Q9Y4E8 981 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-214ENST00000550893 PDCD11Q14690 1871 aaKnown RBP5.51□□□□□ -1.53
SCAF11-214ENST00000550893 DENND4AQ7Z401 1863 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 COL4A3Q01955 1670 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 IGKV6D-21A0A0A0MT36 114 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 ESYT2A0FGR8 921 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 GAGE12BA1L429 117 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 GAGE12HA6NDE8 117 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 GCOM1H8Y6P7 765 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-214ENST00000550893 ENDOD1O94919 500 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 GH1P01241 217 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 POLR2MP0CAP2 368 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 RAP2AP10114 183 aa5.51□□□□□ -1.53
SCAF11-214ENST00000550893 ARP10275 920 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms