RNA–Protein interactions for RNA: ENST00000550651.5

RACGAP1-220, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-220ENST00000550651 CAMK2GQ13555 558 aaPredicted RBP16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 RAB41Q5JT25 222 aa16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 FOXD4L5Q5VV16 416 aaPredicted RBP16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 SERPINA13PQ6UXR4 307 aa16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 FAM124AQ86V42 546 aa16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 OR2T3Q8NH03 318 aa16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 HNRNPLLQ8WVV9 542 aaKnown RBP16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 FOXD4L4Q8WXT5 416 aaPredicted RBP16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 C6orf106Q9H6K1 298 aaPredicted RBP16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 SCUBE2Q9NQ36 999 aa16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 STRIP2Q9ULQ0 834 aa16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 APC2O95996 2303 aa16.92■□□□□ 0.3
RACGAP1-220ENST00000550651 LOC400499M0QZD8 3231 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 SLC12A8A0AV02 714 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 CALUO43852 315 aaPredicted RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 TRIM49P0CI25 452 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 TRIM49CP0CI26 452 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 HLA-EP13747 358 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 ACSL1P33121 698 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 YWHAGP61981 247 aaKnown RBP eCLIP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 ARID5AQ03989 594 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 SUZ12Q15022 739 aaKnown RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 KIF19Q2TAC6 998 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 FOXD4L6Q3SYB3 417 aaPredicted RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 MPPE1Q53F39 396 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 ZNF394Q53GI3 561 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 FOXD4L3Q6VB84 417 aaPredicted RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 INTS8Q75QN2 995 aaKnown RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 RSRC2Q7L4I2 434 aaKnown RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 PIGZQ86VD9 579 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 PLD4Q96BZ4 506 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 HEXIM2Q96MH2 286 aaKnown RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 LHX5Q9H2C1 402 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 TMEM245Q9H330 911 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 OSGEPQ9NPF4 335 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 BTBD3Q9Y2F9 522 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 SNX11Q9Y5W9 270 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 ACACAQ13085 2346 aa16.91■□□□□ 0.3
RACGAP1-220ENST00000550651 HOXD9P28356 352 aaPredicted RBP16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 ENPEPQ07075 957 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 TRIP4Q15650 581 aaPredicted RBP16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 NFIL3Q16649 462 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 PM20D1Q6GTS8 502 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 MARCH9Q86YJ5 346 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 GALNT15Q8N3T1 639 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 SLC4A11Q8NBS3 891 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 CCDC150Q8NCX0 1101 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 SNX19Q92543 992 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 ARID3AQ99856 593 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 ANKRD6Q9Y2G4 727 aa16.9■□□□□ 0.3
RACGAP1-220ENST00000550651 SMG1Q96Q15 3661 aaKnown RBP16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 GCN1Q92616 2671 aaKnown RBP16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 NR2F2P24468 414 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 HLA-FP30511 346 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 GRIA4P48058 902 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 MCCD1P59942 119 aaPredicted RBP16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 PDE4CQ08493 712 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 CAMK2BQ13554 666 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 TEAD4Q15561 434 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 ARHGAP17Q68EM7 881 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 ATL3Q6DD88 541 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 TTC39CQ8N584 583 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 BIRC7Q96CA5 298 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 TMEM176AQ96HP8 235 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 FAXDC2Q96IV6 333 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 MMRN2Q9H8L6 949 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 TM9SF3Q9HD45 589 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 STOML2Q9UJZ1 356 aa16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.89■□□□□ 0.29
RACGAP1-220ENST00000550651 MUC22E2RYF6 1773 aaPredicted RBP16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 TRABD2BA6NFA1 517 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 GOLGA8CPA6NN73 597 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 TNFSF14O43557 240 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 TSPAN3O60637 253 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 SEMA4FO95754 770 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 ZBED1O96006 694 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 F13A1P00488 732 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 MYL1P05976 194 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 ZSCAN22P10073 491 aaPredicted RBP16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 KRT13P13646 458 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 TKTL1P51854 596 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 RAD23BP54727 409 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 ZBTB16Q05516 673 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 CYP4F3Q08477 520 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 PTPRNQ16849 979 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 FNDC3BQ53EP0 1204 aaKnown RBP16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 CHST9Q7L1S5 443 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 BHLHA9Q7RTU4 235 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 KIAA0907Q7Z7F0 614 aaPredicted RBP16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 ADIPOR2Q86V24 386 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 FAM186BQ8IYM0 893 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 ANKRD52Q8NB46 1076 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 WFIKKN2Q8TEU8 576 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 CYB5D2Q8WUJ1 264 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 LRIG1Q96JA1 1093 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 BBC3Q96PG8 261 aaPredicted RBP16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 BTBD1Q9H0C5 482 aa16.88■□□□□ 0.29
RACGAP1-220ENST00000550651 FBRSQ9HAH7 460 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms