RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 FAM237AA0A1B0GTK4 181 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 SPAARA0A1B0GVQ0 90 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 UPK3BL1B0FP48 263 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 UPK3BL2E5RIL1 263 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 NEDD8-MDP1E9PL57 170 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 GFRA2O00451 464 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 CYP26A1O43174 497 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 RHOBTB3O94955 611 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 TBX18O95935 607 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 ENGP17813 658 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 ACO1P21399 889 aaKnown RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 NR2F2P24468 414 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 PLA2G4AP47712 749 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 DGKGP49619 791 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 VAMP7P51809 220 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 KIF11P52732 1056 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 SIM1P81133 766 aaPredicted RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 PKP1Q13835 747 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 EGFLAMQ63HQ2 1017 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 SPOPLQ6IQ16 392 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 GPRIN1Q7Z2K8 1008 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 CCDC186Q7Z3E2 898 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 PDZD3Q86UT5 571 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 CHPFQ8IZ52 775 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 FRMD1Q8N878 549 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 CCDC150Q8NCX0 1101 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 TAS1R2Q8TE23 839 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 IPO4Q8TEX9 1081 aaKnown RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 CCDC47Q96A33 483 aaKnown RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 FAXDC2Q96IV6 333 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 TWNKQ96RR1 684 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 CDK5RAP1Q96SZ6 601 aaKnown RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 FAM124BQ9H5Z6 455 aaPredicted RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 APOBEC3GQ9HC16 384 aaKnown RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 CD248Q9HCU0 757 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.02□□□□□ -1.13
NEK3-201ENST00000550331 OSER1Q9NX31 292 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 CLIC5Q9NZA1 410 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 CALCOCO1Q9P1Z2 691 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 HCN2Q9UL51 889 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 SLC6A14Q9UN76 642 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
NEK3-201ENST00000550331 ATXN2Q99700 1313 aaKnown RBP8.02□□□□□ -1.13
NEK3-201ENST00000550331 IGHV1OR15-9A0A0B4J2B8 117 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 A0A1B0GVL5 298 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 A0A1W2PQH9 124 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 CDC14CA4D256 554 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 TTLL8A6PVC2 850 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 NPC1O15118 1278 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 TRIM24O15164 1050 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 CILPO75339 1184 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 CFIP05156 583 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 SERPINF2P08697 491 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 FURINP09958 794 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 TRIM49P0CI25 452 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 TRIM49CP0CI26 452 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 RALAP11233 206 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 RARGP13631 454 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 KRT13P13646 458 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 NDUFV2P19404 249 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 ITPKAP23677 461 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 RPL13P26373 211 aaKnown RBP8.01□□□□□ -1.13
NEK3-201ENST00000550331 ADORA2BP29275 332 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 GTF2H1P32780 548 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 SYKP43405 635 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 MAPK8P45983 427 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 GCLMP48507 274 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 ZNF132P52740 706 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 ATXN3P54252 364 aaPredicted RBP8.01□□□□□ -1.13
NEK3-201ENST00000550331 MCCD1P59942 119 aaPredicted RBP8.01□□□□□ -1.13
NEK3-201ENST00000550331 GFPT1Q06210 699 aaPredicted RBP8.01□□□□□ -1.13
NEK3-201ENST00000550331 ZNF33AQ06730 810 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 PPP3CAQ08209 521 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 SEMA3BQ13214 749 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 DUOXA1Q1HG43 343 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 COL28A1Q2UY09 1125 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 C10orf120Q5SQS8 335 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 TPGS1Q6ZTW0 290 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 TOGARAM2Q6ZUX3 1019 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 PROSER1Q86XN7 944 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 MIB1Q86YT6 1006 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 FAM186BQ8IYM0 893 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 GUF1Q8N442 669 aaKnown RBP8.01□□□□□ -1.13
NEK3-201ENST00000550331 TTC39CQ8N584 583 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 ACOX2Q99424 681 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 DUSP16Q9BY84 665 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 NMUR1Q9HB89 426 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 CAPN10Q9HC96 672 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 TMEM8AQ9HCN3 771 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 NAGPAQ9UK23 515 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 ZNF510Q9Y2H8 683 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 ANAPC1Q9H1A4 1944 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 APC2O95996 2303 aa8.01□□□□□ -1.13
NEK3-201ENST00000550331 ASH1LQ9NR48 2969 aaKnown RBP8□□□□□ -1.13
NEK3-201ENST00000550331 PLXND1Q9Y4D7 1925 aa8□□□□□ -1.13
NEK3-201ENST00000550331 A0A1W2PQD8 194 aa8□□□□□ -1.13
NEK3-201ENST00000550331 SLC35F4A4IF30 521 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms