RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZCCHC9Q8N567 271 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 KIAA0895Q8NCT3 520 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 MDM1Q8TC05 714 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 RHBDD1Q8TEB9 315 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 FNDC3AQ9Y2H6 1198 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 FRMD4BQ9Y2L6 1034 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 URB1O60287 2271 aaKnown RBP10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 ACACAQ13085 2346 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 KNL1Q8NG31 2342 aa10.33□□□□□ -0.76
TRAFD1-207ENST00000550051 TRABD2BA6NFA1 517 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 CLSTN1O94985 981 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 SLFN14P0C7P3 912 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 PRKCHP24723 683 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 CSNK1EP49674 416 aaKnown RBP10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 VAMP7P51809 220 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 RAB41Q5JT25 222 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 PPP1R26Q5T8A7 1209 aaPredicted RBP10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 RESP18Q5W5W9 173 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 ATL3Q6DD88 541 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 PM20D1Q6GTS8 502 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 KIAA0907Q7Z7F0 614 aaPredicted RBP10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 DENND1CQ8IV53 801 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 OR2T3Q8NH03 318 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 HNRNPLLQ8WVV9 542 aaKnown RBP10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 JAKMIP2Q96AA8 810 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 TMEM245Q9H330 911 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 APOBEC3GQ9HC16 384 aaKnown RBP10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 MARCH2Q9P0N8 246 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 STRIP2Q9ULQ0 834 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 CLEC4EQ9ULY5 219 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 PCDHA7Q9UN72 937 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 RAXQ9Y2V3 346 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 TMEM131Q92545 1883 aa10.32□□□□□ -0.76
TRAFD1-207ENST00000550051 A0A087WV48 116 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 A0A1B0GVT2 93 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 E9PAM4 449 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 PAPSS1O43252 624 aaPredicted RBP10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 TNFSF14O43557 240 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 PCDHGA12O60330 932 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 DFNA5O60443 496 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 EPHX1P07099 455 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 ACSL1P33121 698 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 PIK3CAP42336 1068 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 ZBTB16Q05516 673 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 PPP3CAQ08209 521 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 EFEMP1Q12805 493 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 TEAD4Q15561 434 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 SMAD1Q15797 465 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 NFIL3Q16649 462 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 PTPRNQ16849 979 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 KIF19Q2TAC6 998 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 KMT5BQ4FZB7 885 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 MPPE1Q53F39 396 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 SERPINA13PQ6UXR4 307 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 SCUBE3Q8IX30 993 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 CEP57L1Q8IYX8 460 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 TTC39CQ8N584 583 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 TAS1R2Q8TE23 839 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 DDI1Q8WTU0 396 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 SORCS1Q8WY21 1168 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 IGSF8Q969P0 613 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 PAGE5Q96GU1 130 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 HEXIM2Q96MH2 286 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 IMPG2Q9BZV3 1241 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 CIPCQ9C0C6 399 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 NIF3L1Q9GZT8 377 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 FBRSQ9HAH7 460 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 SERTAD1Q9UHV2 236 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 RASAL2Q9UJF2 1139 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 STOML2Q9UJZ1 356 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 PLA2G4CQ9UP65 541 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 ANKRD6Q9Y2G4 727 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 SNX11Q9Y5W9 270 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 NUMA1Q14980 2115 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
TRAFD1-207ENST00000550051 KNTC1P50748 2209 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 GOLGA4Q13439 2230 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 SLC12A8A0AV02 714 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 CALUO43852 315 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 TSPAN3O60637 253 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 KIF20AO95235 890 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 MYL1P05976 194 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 HMBSP08397 361 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 CD27P26842 260 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 GTF2H1P32780 548 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 GRK6P43250 576 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 GRIA4P48058 902 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 ZNF445P59923 1031 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 YWHAGP61981 247 aaKnown RBP eCLIP10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 ARID5AQ03989 594 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 CYP4F3Q08477 520 aa10.3□□□□□ -0.76
TRAFD1-207ENST00000550051 ARHGAP17Q68EM7 881 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms