RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 RASGRP2Q7LDG7 609 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 GRASPQ7Z6J2 395 aaPredicted RBP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 FSTL5Q8N475 847 aaPredicted RBP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 C11orf44Q8N8P7 122 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 CEP70Q8NHQ1 597 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 SOCS4Q8WXH5 440 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 OVCA2Q8WZ82 227 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 HDAC2Q92769 488 aaKnown RBP4.71□□□□□ -1.66
SNRPF-202ENST00000549580 GOLGA1Q92805 767 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 RSPRY1Q96DX4 576 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 REEP2Q9BRK0 252 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 C1QTNF7Q9BXJ2 289 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 ACTRT3Q9BYD9 372 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 AGXT2Q9BYV1 514 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 NOD2Q9HC29 1040 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 KCNK9Q9NPC2 374 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 KCND3Q9UK17 655 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 ZBTB1Q9Y2K1 713 aa4.71□□□□□ -1.66
SNRPF-202ENST00000549580 LMTK3Q96Q04 1460 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 TRGV11A0A075B6L2 103 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 LOC105369274A0A096LPK9 316 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 LOC102723532A0A0G2JNH3 316 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 EXOC5O00471 708 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 KRT38O76015 456 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 LDHCP07864 332 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 ITGAMP11215 1152 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 MTHFSP49914 203 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 KCNJ12Q14500 433 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 ANKRD1Q15327 319 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 RPS6KA2Q15349 733 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 AASDHQ4L235 1098 aaPredicted RBP4.7□□□□□ -1.66
SNRPF-202ENST00000549580 DGAT2L7PQ6IED9 249 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 SYT13Q7L8C5 426 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 RAB11FIP4Q86YS3 637 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 OR4N4Q8N0Y3 316 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 HMGB4Q8WW32 186 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 GLG1Q92896 1179 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 HVCN1Q96D96 273 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 KTI12Q96EK9 354 aaPredicted RBP4.7□□□□□ -1.66
SNRPF-202ENST00000549580 RRP36Q96EU6 259 aaKnown RBP4.7□□□□□ -1.66
SNRPF-202ENST00000549580 MCRS1Q96EZ8 462 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 MECRQ9BV79 373 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 TPSD1Q9BZJ3 242 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 GPR63Q9BZJ6 419 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 SMC4Q9NTJ3 1288 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 LIN7CQ9NUP9 197 aaKnown RBP4.7□□□□□ -1.66
SNRPF-202ENST00000549580 TMLHEQ9NVH6 421 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 DNAJC16Q9Y2G8 782 aa4.7□□□□□ -1.66
SNRPF-202ENST00000549580 RRP7AQ9Y3A4 280 aaKnown RBP4.7□□□□□ -1.66
SNRPF-202ENST00000549580 A1L4Q6 167 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 CGB1A6NKQ9 187 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 SLC38A8A6NNN8 435 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 A8MVJ9 347 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 SLC16A3O15427 465 aaKnown RBP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 PROM1O43490 865 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 TSPAN3O60637 253 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 CDKL5O76039 1030 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 VNN1O95497 513 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 TBX18O95935 607 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 PDHA1P08559 390 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 IFIT1P09914 478 aaKnown RBP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 PPP3CBP16298 524 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 GSTM5P46439 218 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 ZNF81P51508 661 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 RBM5P52756 815 aaKnown RBP eCLIP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 EIF4A1P60842 406 aaKnown RBP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 SIM1P81133 766 aaPredicted RBP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 MPP3Q13368 585 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 DCTN1Q14203 1278 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 NBPF8Q3BBV2 869 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 CTXN3Q4LDR2 81 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 ABHD17BQ5VST6 288 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 ATG16L1Q676U5 607 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 CCDC144NLQ6NUI1 221 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 DSTYKQ6XUX3 929 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 CAND1Q86VP6 1230 aaKnown RBP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 CAGE1Q8TC20 777 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 SLC22A17Q8WUG5 538 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 RFFLQ8WZ73 363 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 CTHRC1Q96CG8 243 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 WDYHV1Q96HA8 205 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 PREBQ9HCU5 417 aa4.69□□□□□ -1.66
SNRPF-202ENST00000549580 NKX1-2Q9UD57 310 aaPredicted RBP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 FBXO2Q9UK22 296 aaPredicted RBP4.69□□□□□ -1.66
SNRPF-202ENST00000549580 SAC3D1A6NKF1 404 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 PRSS47A8MTI9 375 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 F5H0A9 414 aaPredicted RBP4.68□□□□□ -1.66
SNRPF-202ENST00000549580 STX16-NPEPL1H3BU86 382 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 M0QZQ0 153 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 STX16O14662 325 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 DDX58O95786 925 aaKnown RBP4.68□□□□□ -1.66
SNRPF-202ENST00000549580 TMEM225BP0DP42 221 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 DGKQP52824 942 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 NXPH1P58417 271 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 ITIH3Q06033 890 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 SEMA3BQ13214 749 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 ST3GAL2Q16842 350 aa4.68□□□□□ -1.66
SNRPF-202ENST00000549580 AAK1Q2M2I8 961 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms