RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 VAC14Q08AM6 782 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 ORC1Q13415 861 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 STARD3Q14849 445 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 BMT2Q1RMZ1 405 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 KIF19Q2TAC6 998 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 ARHGAP40Q5TG30 622 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 HES3Q5TGS1 186 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 KIAA1324Q6UXG2 1013 aaKnown RBP8.92□□□□□ -0.98
TROAP-208ENST00000548817 TPGS1Q6ZTW0 290 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 HTR3DQ70Z44 454 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 UNC93AQ86WB7 457 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 LSMEM2Q8N112 164 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 CCDC150Q8NCX0 1101 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 SLC2A14Q8TDB8 520 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 RFFLQ8WZ73 363 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 TAF4BQ92750 862 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 CCDC47Q96A33 483 aaKnown RBP8.92□□□□□ -0.98
TROAP-208ENST00000548817 HIC2Q96JB3 615 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 DPH1Q9BZG8 443 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 IMPG2Q9BZV3 1241 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 XYLT2Q9H1B5 865 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 ITM2CQ9NQX7 267 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 EXOC1Q9NV70 894 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 TMEM30AQ9NV96 361 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 IL37Q9NZH6 218 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 EIF2B4Q9UI10 523 aaKnown RBP8.92□□□□□ -0.98
TROAP-208ENST00000548817 HCN2Q9UL51 889 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 FRMD4BQ9Y2L6 1034 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 NME7Q9Y5B8 376 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 TMEM131Q92545 1883 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 K7ELQ4 463 aaPredicted RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 ZDHHC11BP0C7U3 371 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 RALAP11233 206 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 TYRP14679 529 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 ADORA2BP29275 332 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 PLA2G4AP47712 749 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 DGKGP49619 791 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 ACADVLP49748 655 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 NDST1P52848 882 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 FOXD4L6Q3SYB3 417 aaPredicted RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 C10orf120Q5SQS8 335 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 EGFLAMQ63HQ2 1017 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 SHC4Q6S5L8 630 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 FOXD4L3Q6VB84 417 aaPredicted RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 ATG14Q6ZNE5 492 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 MIB1Q86YT6 1006 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 DHX40Q8IX18 779 aaKnown RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 FUKQ8N0W3 1084 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 CRYBG2Q8N1P7 616 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 PARD3BQ8TEW8 1205 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 UCMAQ8WVF2 138 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 FOXD4L4Q8WXT5 416 aaPredicted RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 JAKMIP2Q96AA8 810 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 ZFRQ96KR1 1074 aaKnown RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 CDK5RAP1Q96SZ6 601 aaKnown RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 NUP58Q9BVL2 599 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 KLF16Q9BXK1 252 aaPredicted RBP8.91□□□□□ -0.98
TROAP-208ENST00000548817 CPNE5Q9HCH3 593 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 CD93Q9NPY3 652 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 ANKRD6Q9Y2G4 727 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 ZNF510Q9Y2H8 683 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 SNX11Q9Y5W9 270 aa8.91□□□□□ -0.98
TROAP-208ENST00000548817 FAM92AA1XBS5 289 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 LRRIQ3A6PVS8 624 aaPredicted RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 NPC1O15118 1278 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 YKT6O15498 198 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 CALUO43852 315 aaPredicted RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 CACNG3O60359 315 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 SYNCRIPO60506 623 aaKnown RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 DXOO77932 396 aaKnown RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 LDOC1O95751 146 aaPredicted RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 TBX18O95935 607 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 AFPP02771 609 aaKnown RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 CYBBP04839 570 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 RARGP13631 454 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 CCDC130P13994 396 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 ACO1P21399 889 aaKnown RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 CASP1P29466 404 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 PIK3CAP42336 1068 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 CSNK1EP49674 416 aaKnown RBP8.9□□□□□ -0.98
TROAP-208ENST00000548817 PSEN1P49768 467 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 ERVPABLB-1P60509 514 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 ARID5AQ03989 594 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 CUL4BQ13620 913 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 CEP135Q66GS9 1140 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 ATL3Q6DD88 541 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 PAQR9Q6ZVX9 377 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 SLC9A9Q8IVB4 645 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 DCBLD1Q8N8Z6 715 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 TMC2Q8TDI7 906 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 KCNE4Q8WWG9 221 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 ERLEC1Q96DZ1 483 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 CYFIP2Q96F07 1278 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 SMOQ99835 787 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 NT5C1AQ9BXI3 368 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 DCLK3Q9C098 648 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 FAM49BQ9NUQ9 324 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 SEPT3Q9UH03 358 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms