RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 MPOP05164 745 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 ADH5P11766 374 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 CDK4P11802 303 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 UBE2HP62256 183 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 INSM1Q01101 510 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-217ENST00000548420 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-217ENST00000548420 LY6G5CQ5SRR4 150 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 C1orf220Q5T0J3 134 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 SMYD4Q8IYR2 804 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-217ENST00000548420 CACTIN-AS1Q8N1I8 211 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 C2orf15Q8WU43 125 aaKnown RBP14.78□□□□□ -0.04
PTCH1-217ENST00000548420 ERCC4Q92889 916 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-217ENST00000548420 SMARCE1Q969G3 411 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 TRMT2BQ96GJ1 504 aaKnown RBP14.78□□□□□ -0.04
PTCH1-217ENST00000548420 PKMYT1Q99640 499 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 ACBD6Q9BR61 282 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 XYLT2Q9H1B5 865 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 VRTNQ9H8Y1 702 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 ITM2CQ9NQX7 267 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 CLCA2Q9UQC9 943 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 STARD13Q9Y3M8 1113 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 SNX9Q9Y5X1 595 aa14.78□□□□□ -0.04
PTCH1-217ENST00000548420 TULP3O75386 442 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 NR2F2P24468 414 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.05
PTCH1-217ENST00000548420 ATICP31939 592 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 CTSKP43235 329 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 LHX1P48742 406 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 AFF3P51826 1226 aaKnown RBP14.77□□□□□ -0.05
PTCH1-217ENST00000548420 DLG4P78352 724 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 ADAM9Q13443 819 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 SHBQ15464 509 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 TDRD10Q5VZ19 366 aaKnown RBP14.77□□□□□ -0.05
PTCH1-217ENST00000548420 KDM7AQ6ZMT4 941 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 METTL3Q86U44 580 aaKnown RBP14.77□□□□□ -0.05
PTCH1-217ENST00000548420 OSTM1Q86WC4 334 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 ZC3H3Q8IXZ2 948 aaKnown RBP14.77□□□□□ -0.05
PTCH1-217ENST00000548420 KBTBD7Q8WVZ9 684 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 RFFLQ8WZ73 363 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 RNF38Q9H0F5 515 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 SEPT3Q9UH03 358 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 FRMD4BQ9Y2L6 1034 aa14.77□□□□□ -0.05
PTCH1-217ENST00000548420 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-217ENST00000548420 TULP1O00294 542 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-217ENST00000548420 TACC1O75410 805 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 VNN1O95497 513 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 BMP6P22004 513 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 IGFBP7Q16270 282 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 ZACNQ401N2 412 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 CEP135Q66GS9 1140 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 CHPFQ8IZ52 775 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 DCP1BQ8IZD4 617 aaKnown RBP14.76□□□□□ -0.05
PTCH1-217ENST00000548420 TERB1Q8NA31 727 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 DPH1Q9BZG8 443 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 MKRN2Q9H000 416 aaKnown RBP14.76□□□□□ -0.05
PTCH1-217ENST00000548420 TM9SF3Q9HD45 589 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 ASCL3Q9NQ33 180 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 DDX43Q9NXZ2 648 aaKnown RBP14.76□□□□□ -0.05
PTCH1-217ENST00000548420 MAN1B1Q9UKM7 699 aa14.76□□□□□ -0.05
PTCH1-217ENST00000548420 R3HCC1Q9Y3T6 440 aaKnown RBP14.76□□□□□ -0.05
PTCH1-217ENST00000548420 A0A1B0GTQ1 180 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 ZBTB24O43167 697 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-217ENST00000548420 EFSO43281 561 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 DXOO77932 396 aaKnown RBP14.75□□□□□ -0.05
PTCH1-217ENST00000548420 WARSP23381 471 aaKnown RBP14.75□□□□□ -0.05
PTCH1-217ENST00000548420 PSMC2P35998 433 aaKnown RBP14.75□□□□□ -0.05
PTCH1-217ENST00000548420 TPMTP51580 245 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 VAMP7P51809 220 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 MYL6P60660 151 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 ANKRD40Q6AI12 368 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 FAM171BQ6P995 826 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 INTS8Q75QN2 995 aaKnown RBP14.75□□□□□ -0.05
PTCH1-217ENST00000548420 SV2AQ7L0J3 742 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 ADGRF2Q8IZF7 708 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 SYAP1Q96A49 352 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-217ENST00000548420 UXTQ9UBK9 157 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-217ENST00000548420 PCDHB5Q9Y5E4 795 aa14.75□□□□□ -0.05
PTCH1-217ENST00000548420 ZFHX3Q15911 3703 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 PRRT4C9JH25 899 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 ADH1CP00326 375 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 CD44P16070 742 aaKnown RBP14.74□□□□□ -0.05
PTCH1-217ENST00000548420 CYP2F1P24903 491 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 LMO2P25791 158 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 PCSK1P29120 753 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 PMS1P54277 932 aaKnown RBP14.74□□□□□ -0.05
PTCH1-217ENST00000548420 MYL7Q01449 175 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 TSPY1Q01534 308 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 TRPC3Q13507 836 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 NCOA4Q13772 614 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 MORC3Q14149 939 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 NFE2Q16621 373 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-217ENST00000548420 CCDC142Q17RM4 750 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 WDR72Q3MJ13 1102 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 INTS6LQ5JSJ4 861 aaKnown RBP14.74□□□□□ -0.05
PTCH1-217ENST00000548420 FOXR2Q6PJQ5 311 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 FAM186BQ8IYM0 893 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 EID2Q8N6I1 236 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 DHTKD1Q96HY7 919 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-217ENST00000548420 VCPIP1Q96JH7 1222 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 ABCB6Q9NP58 842 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms