RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, humanhuman

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-208ENST00000547148 MARCKSL1P49006 195 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 COG7P83436 770 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 SCAPQ12770 1279 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 USP4Q13107 963 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 ZNF77Q15935 545 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 NUGGCQ68CJ6 796 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 NYAP1Q6ZVC0 841 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 SND1Q7KZF4 910 aaKnown RBP eCLIP12.38□□□□□ -0.43
PFKM-208ENST00000547148 ARID3BQ8IVW6 561 aaPredicted RBP12.38□□□□□ -0.43
PFKM-208ENST00000547148 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 RSPRY1Q96DX4 576 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 C11orf16Q9NQ32 467 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 TMPRSS4Q9NRS4 437 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 PCSK1NQ9UHG2 260 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
PFKM-208ENST00000547148 DENND4CQ5VZ89 1909 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 LEFTY2O00292 366 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 PSTPIP1O43586 416 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 PRPSAP2O60256 369 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 APOEP02649 317 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 KLKB1P03952 638 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 IRF1P10914 325 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 SLC2A3P11169 496 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 CTNNA2P26232 953 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 CTNNA1P35221 906 aaKnown RBP12.37□□□□□ -0.43
PFKM-208ENST00000547148 ADRA1BP35368 520 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 AIF1P55008 147 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 SMAD2Q15796 467 aaKnown RBP12.37□□□□□ -0.43
PFKM-208ENST00000547148 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 LRRC38Q5VT99 294 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 SCYL2Q6P3W7 929 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 Q6ZNB5 142 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 PEX26Q7Z412 305 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 POLNQ7Z5Q5 900 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 SLC35F6Q8N357 371 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 SH3RF2Q8TEC5 729 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 TEKT4Q8WW24 435 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 KRT35Q92764 455 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 ACSF2Q96CM8 615 aaPredicted RBP12.37□□□□□ -0.43
PFKM-208ENST00000547148 LRRC3BQ96PB8 259 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 SNRNP25Q9BV90 132 aaKnown RBP12.37□□□□□ -0.43
PFKM-208ENST00000547148 TKTL2Q9H0I9 626 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 WDCPQ9H6R7 721 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 TRPV4Q9HBA0 871 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 TDP1Q9NUW8 608 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.37□□□□□ -0.43
PFKM-208ENST00000547148 CFAP97Q9P2B7 532 aa12.37□□□□□ -0.43
PFKM-208ENST00000547148 XPO7Q9UIA9 1087 aaKnown RBP12.37□□□□□ -0.43
PFKM-208ENST00000547148 ZFP37Q9Y6Q3 630 aaPredicted RBP12.37□□□□□ -0.43
PFKM-208ENST00000547148 PRR33A8MZF0 331 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 PAGE1O75459 146 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 MOCS2O96007 188 aaPredicted RBP12.36□□□□□ -0.43
PFKM-208ENST00000547148 RARAP10276 462 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 LAMP2P13473 410 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 CORO1AP31146 461 aaKnown RBP12.36□□□□□ -0.43
PFKM-208ENST00000547148 GBP2P32456 591 aaPredicted RBP12.36□□□□□ -0.43
PFKM-208ENST00000547148 VIPR2P41587 438 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 HARS2P49590 506 aaKnown RBP12.36□□□□□ -0.43
PFKM-208ENST00000547148 CA9Q16790 459 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 SMTNL2Q2TAL5 461 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 KCNT1Q5JUK3 1230 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 MEI1Q5TIA1 1274 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 PIK3R6Q5UE93 754 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 OTOP3Q7RTS5 596 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 DDX42Q86XP3 938 aaKnown RBP eCLIP12.36□□□□□ -0.43
PFKM-208ENST00000547148 PSTKQ8IV42 348 aaKnown RBP12.36□□□□□ -0.43
PFKM-208ENST00000547148 UNC45BQ8IWX7 931 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 RHOT1Q8IXI2 618 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 RNF34Q969K3 372 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 AZIN2Q96A70 460 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 HES6Q96HZ4 224 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 WDR24Q96S15 920 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 GPATCH2LQ9NWQ4 482 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 EPS15L1Q9UBC2 864 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 STOML2Q9UJZ1 356 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 AMFRQ9UKV5 643 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
PFKM-208ENST00000547148 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
PFKM-208ENST00000547148 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 SCAMP3O14828 347 aaKnown RBP12.35□□□□□ -0.43
PFKM-208ENST00000547148 DDX3YO15523 660 aaKnown RBP12.35□□□□□ -0.43
PFKM-208ENST00000547148 LATS1O95835 1130 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 KRT7P08729 469 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
PFKM-208ENST00000547148 GJC1P36383 396 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
PFKM-208ENST00000547148 PEX5P50542 639 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 ARSEP51690 589 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 GNG11P61952 73 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 SEMA3BQ13214 749 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 MTA1Q13330 715 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 DPYSL2Q16555 572 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 HADHQ16836 314 aaKnown RBP12.35□□□□□ -0.43
PFKM-208ENST00000547148 ARL13BQ3SXY8 428 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 ATP13A4Q4VNC1 1196 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 BOLA3Q53S33 107 aa12.35□□□□□ -0.43
PFKM-208ENST00000547148 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms