RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 DCLK3Q9C098 648 aa15.16■□□□□ 0.02
USP15-206ENST00000546718 NIF3L1Q9GZT8 377 aa15.16■□□□□ 0.02
USP15-206ENST00000546718 PCED1AQ9H1Q7 454 aa15.16■□□□□ 0.02
USP15-206ENST00000546718 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.16■□□□□ 0.02
USP15-206ENST00000546718 SNX11Q9Y5W9 270 aa15.16■□□□□ 0.02
USP15-206ENST00000546718 GOLGA8CPA6NN73 597 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 PDXKO00764 312 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 ACTN4O43707 911 aaKnown RBP15.15■□□□□ 0.02
USP15-206ENST00000546718 TRIM49P0CI25 452 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 TRIM49CP0CI26 452 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 C7P10643 843 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 TRIM21P19474 475 aaKnown RBP15.15■□□□□ 0.02
USP15-206ENST00000546718 HOXD9P28356 352 aaPredicted RBP15.15■□□□□ 0.02
USP15-206ENST00000546718 GCLMP48507 274 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 PPP3CAQ08209 521 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 CAMK2GQ13555 558 aaPredicted RBP15.15■□□□□ 0.02
USP15-206ENST00000546718 CEP135Q66GS9 1140 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 ZNF366Q8N895 744 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 OR2T3Q8NH03 318 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 RHBDD1Q8TEB9 315 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 CRELD1Q96HD1 420 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 CDC6Q99741 560 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 TMEM245Q9H330 911 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 CYP3A43Q9HB55 503 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 TM9SF3Q9HD45 589 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 EXOC1Q9NV70 894 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 MARCH2Q9P0N8 246 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 PCDHA7Q9UN72 937 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
USP15-206ENST00000546718 FLNBO75369 2602 aaKnown RBP15.15■□□□□ 0.02
USP15-206ENST00000546718 TENM4Q6N022 2769 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 CABIN1Q9Y6J0 2220 aa15.15■□□□□ 0.02
USP15-206ENST00000546718 FAM149AA5PLN7 773 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 CYBBP04839 570 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 HLA-FP30511 346 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 VAMP7P51809 220 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 CYP4F3Q08477 520 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 PTPRNQ16849 979 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 FOXD4L6Q3SYB3 417 aaPredicted RBP15.14■□□□□ 0.01
USP15-206ENST00000546718 KMT5BQ4FZB7 885 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 ZNF394Q53GI3 561 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 RAB41Q5JT25 222 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 KCNT1Q5JUK3 1230 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 FOXD4L3Q6VB84 417 aaPredicted RBP15.14■□□□□ 0.01
USP15-206ENST00000546718 BHLHA9Q7RTU4 235 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 ZC3H3Q8IXZ2 948 aaKnown RBP15.14■□□□□ 0.01
USP15-206ENST00000546718 DDI1Q8WTU0 396 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 SLC2A11Q9BYW1 496 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 IMPG2Q9BZV3 1241 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 LHX5Q9H2C1 402 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 SERTAD1Q9UHV2 236 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 MGAQ8IWI9 3026 aa15.14■□□□□ 0.01
USP15-206ENST00000546718 TP53BP1Q12888 1972 aaPredicted RBP15.14■□□□□ 0.01
USP15-206ENST00000546718 URB1O60287 2271 aaKnown RBP15.13■□□□□ 0.01
USP15-206ENST00000546718 SLC12A8A0AV02 714 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 TRABD2BA6NFA1 517 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 KCNK3O14649 394 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 SLFN14P0C7P3 912 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 GRIA4P48058 902 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 ME1P48163 572 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 YWHAGP61981 247 aaKnown RBP eCLIP15.13■□□□□ 0.01
USP15-206ENST00000546718 SMAD1Q15797 465 aaKnown RBP15.13■□□□□ 0.01
USP15-206ENST00000546718 FOXD4L5Q5VV16 416 aaPredicted RBP15.13■□□□□ 0.01
USP15-206ENST00000546718 PIGZQ86VD9 579 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 GALNT15Q8N3T1 639 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 CYB5D2Q8WUJ1 264 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 FOXD4L4Q8WXT5 416 aaPredicted RBP15.13■□□□□ 0.01
USP15-206ENST00000546718 BIRC7Q96CA5 298 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 PAGE5Q96GU1 130 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 ARID3AQ99856 593 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 ORAI3Q9BRQ5 295 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 OSGEPQ9NPF4 335 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 FAM13BQ9NYF5 915 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 ANKRD6Q9Y2G4 727 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 FRMD4BQ9Y2L6 1034 aa15.13■□□□□ 0.01
USP15-206ENST00000546718 GOLGA4Q13439 2230 aaKnown RBP15.12■□□□□ 0.01
USP15-206ENST00000546718 A0A087WV48 116 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 H0Y8X5 98 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 MAPK13O15264 365 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 TNFSF14O43557 240 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 SEMA4FO95754 770 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 PDIA4P13667 645 aaKnown RBP15.12■□□□□ 0.01
USP15-206ENST00000546718 GRK6P43250 576 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 TRIP4Q15650 581 aaPredicted RBP15.12■□□□□ 0.01
USP15-206ENST00000546718 FNDC3BQ53EP0 1204 aaKnown RBP15.12■□□□□ 0.01
USP15-206ENST00000546718 RSRC2Q7L4I2 434 aaKnown RBP15.12■□□□□ 0.01
USP15-206ENST00000546718 ADIPOR2Q86V24 386 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 CEP57L1Q8IYX8 460 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 SLC4A11Q8NBS3 891 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 IGSF8Q969P0 613 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 PLD4Q96BZ4 506 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 STRIP2Q9ULQ0 834 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 TRAF3IP3Q9Y228 551 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 PLXNA2O75051 1894 aa15.12■□□□□ 0.01
USP15-206ENST00000546718 COL5A1P20908 1838 aaPredicted RBP15.11■□□□□ 0.01
USP15-206ENST00000546718 K7ELQ4 463 aaPredicted RBP15.11■□□□□ 0.01
USP15-206ENST00000546718 TULP2O00295 520 aa15.11■□□□□ 0.01
USP15-206ENST00000546718 TIMM44O43615 452 aa15.11■□□□□ 0.01
USP15-206ENST00000546718 PCDHGA12O60330 932 aa15.11■□□□□ 0.01
USP15-206ENST00000546718 TSPAN3O60637 253 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms