RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 GTF3C6Q969F1 213 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 SNX25Q9H3E2 840 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 SGK2Q9HBY8 427 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 WDR70Q9NW82 654 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 OSER1Q9NX31 292 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 RBAKQ9NYW8 714 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 LSM7Q9UK45 103 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 SATB2Q9UPW6 733 aa16.21■□□□□ 0.19
CLSTN3-216ENST00000545663 BLACEA4D250 179 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 YKT6O15498 198 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 KLKB1P03952 638 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 DNTTP04053 509 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 RXRGP48443 463 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 GALCP54803 685 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 NXPH1P58417 271 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 KCNA1Q09470 495 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 C3orf38Q5JPI3 329 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 NCEH1Q6PIU2 408 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 DTHD1Q6ZMT9 781 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 ANKS1BQ7Z6G8 1248 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 OR6B3Q8NGW1 331 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 CYB5D2Q8WUJ1 264 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 SKA1Q96BD8 255 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 SLC46A1Q96NT5 459 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 DEPDC7Q96QD5 511 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 ARHGAP9Q9BRR9 750 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 CAAP1Q9H8G2 361 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 PRSS16Q9NQE7 514 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 SERGEFQ9UGK8 458 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 MYH10P35580 1976 aa16.2■□□□□ 0.18
CLSTN3-216ENST00000545663 CELSR2Q9HCU4 2923 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 SPTBN1Q01082 2364 aaKnown RBP16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 TLR4O00206 839 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 C7P10643 843 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 SCP2P22307 547 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 FNDC3BQ53EP0 1204 aaKnown RBP16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 PAQR9Q6ZVX9 377 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 TMC6Q7Z403 805 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 SLC25A45Q8N413 288 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 GANCQ8TET4 914 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 NOC3LQ8WTT2 800 aaKnown RBP16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 TMEM245Q9H330 911 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 FOXP1Q9H334 677 aaPredicted RBP16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 MTG2Q9H4K7 406 aa16.19■□□□□ 0.18
CLSTN3-216ENST00000545663 A0A1B0GVM2 712 aa16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 FAM92AA1XBS5 289 aa16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 TMEM191BP0C7N4 346 aa16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 RBMS1P29558 406 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 ATP5C1P36542 298 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 DAB2P98082 770 aa16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 SRSF6Q13247 344 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 ZNF211Q13398 564 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 TMEM119Q4V9L6 283 aa16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 PRR11Q96HE9 360 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 CCNL2Q96S94 520 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-216ENST00000545663 ITPR3Q14573 2671 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 STC2O76061 302 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 TRAPPC10P48553 1259 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 ANAPC15P60006 121 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 ARID5AQ03989 594 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 SGO2Q562F6 1265 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 ATXN7L3BQ96GX2 97 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 SERAC1Q96JX3 654 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 ERVMER34-1Q9H9K5 563 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 NMUR1Q9HB89 426 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 CRYBG3Q68DQ2 2970 aa16.17■□□□□ 0.18
CLSTN3-216ENST00000545663 BEST1O76090 585 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 GOLGA8FQ08AF8 430 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 GOLGA8DPQ0D2H9 430 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 EIF4HQ15056 248 aaKnown RBP16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 POSTNQ15063 836 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 FOXR1Q6PIV2 292 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 USP53Q70EK8 1073 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 PTRH1Q86Y79 214 aaKnown RBP16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 B3GALNT2Q8NCR0 500 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 CDK5RAP3Q96JB5 506 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 NEUROG2Q9H2A3 272 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 CYLDQ9NQC7 956 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 INTS13Q9NVM9 706 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 UCKL1Q9NWZ5 548 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 FBXL12Q9NXK8 326 aa16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 R3HCC1Q9Y3T6 440 aaKnown RBP16.16■□□□□ 0.18
CLSTN3-216ENST00000545663 ICE1Q9Y2F5 2266 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 A8MXQ7 604 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 TIMM44O43615 452 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 KRT18P05783 430 aaKnown RBP16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 DDIT3P35638 169 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 FOXK1P85037 733 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 MCM6Q14566 821 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 ISXQ2M1V0 245 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 TTC31Q49AM3 519 aaPredicted RBP16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 IGF2-ASQ6U949 168 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 XKR5Q6UX68 686 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 ZNF720Q7Z2F6 126 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 FAM35AQ86V20 835 aa16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 ZC3H3Q8IXZ2 948 aaKnown RBP16.15■□□□□ 0.18
CLSTN3-216ENST00000545663 ZMIZ2Q8NF64 920 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms