RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 ELMOD1Q8N336 334 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 DNASE2BQ8WZ79 361 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 POLR3CQ9BUI4 534 aaPredicted RBP7.27□□□□□ -1.25
LDHA-223ENST00000545215 MRPL4Q9BYD3 311 aaKnown RBP7.27□□□□□ -1.25
LDHA-223ENST00000545215 ADNPQ9H2P0 1102 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 EBF3Q9H4W6 596 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 CYP4F12Q9HCS2 524 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 C6orf50Q9HD87 102 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 ASAH2Q9NR71 780 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 CEP72Q9P209 647 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 MTRRQ9UBK8 725 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 NFE2L3Q9Y4A8 694 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 CDY1Q9Y6F8 540 aa7.27□□□□□ -1.25
LDHA-223ENST00000545215 A0A0A0MRY4 1105 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 IGHV1OR15-9A0A0B4J2B8 117 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 ANTXRLA6NF34 631 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 MAGEB2O15479 319 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 CTDNEP1O95476 244 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 FOSP01100 380 aaPredicted RBP7.26□□□□□ -1.25
LDHA-223ENST00000545215 PRKCGP05129 697 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 SFPQP23246 707 aaKnown RBP eCLIP7.26□□□□□ -1.25
LDHA-223ENST00000545215 TMOD1P28289 359 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 ELF1P32519 619 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 NAPAP54920 295 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 ASIC1P78348 528 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 CLCA4Q14CN2 919 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 SAFBQ15424 915 aaKnown RBP eCLIP7.26□□□□□ -1.25
LDHA-223ENST00000545215 SMTNL2Q2TAL5 461 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 ZSCAN23Q3MJ62 389 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 STXBP5Q5T5C0 1151 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 CCDC181Q5TID7 509 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 TRIM68Q6AZZ1 485 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 KANSL1Q7Z3B3 1105 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 LRRN4CLQ8ND94 238 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 RABGGTAQ92696 567 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 SCLT1Q96NL6 688 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 GCOM2Q9BZD3 368 aaPredicted RBP7.26□□□□□ -1.25
LDHA-223ENST00000545215 POLR1BQ9H9Y6 1135 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 PCDHA6Q9UN73 950 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 PCDHB1Q9Y5F3 818 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 PCDHA8Q9Y5H6 950 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 INSL5Q9Y5Q6 135 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 UBIAD1Q9Y5Z9 338 aa7.26□□□□□ -1.25
LDHA-223ENST00000545215 SHOXO15266 292 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 MAFGO15525 162 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 MTSS1O43312 755 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 PRAMEF12O95522 483 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 LDOC1O95751 146 aaPredicted RBP7.25□□□□□ -1.25
LDHA-223ENST00000545215 FDPSP14324 419 aaKnown RBP7.25□□□□□ -1.25
LDHA-223ENST00000545215 ATF2P15336 505 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 GJB2P29033 226 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 SOX5P35711 763 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 GRIA2P42262 883 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 SCNN1GP51170 649 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 ADCY7P51828 1080 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 NLRP5P59047 1200 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 MRPS21P82921 87 aaKnown RBP7.25□□□□□ -1.25
LDHA-223ENST00000545215 INSM1Q01101 510 aaPredicted RBP7.25□□□□□ -1.25
LDHA-223ENST00000545215 ST3GAL1Q11201 340 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 ILKQ13418 452 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 INAVAQ3KP66 663 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 WWC2Q6AWC2 1192 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 IGF2-ASQ6U949 168 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 KDM7AQ6ZMT4 941 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 ACAD11Q709F0 780 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 CXXC5Q7LFL8 322 aaKnown RBP7.25□□□□□ -1.25
LDHA-223ENST00000545215 FERMT3Q86UX7 667 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 FBXO18Q8NFZ0 1043 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 C8orf76Q96K31 380 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 SDF4Q9BRK5 362 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 LGR4Q9BXB1 951 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 UNKQ9C0B0 810 aaKnown RBP7.25□□□□□ -1.25
LDHA-223ENST00000545215 ZMYND12Q9H0C1 365 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 TMEM245Q9H330 911 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 RIC8AQ9NPQ8 531 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 INTS7Q9NVH2 962 aaKnown RBP7.25□□□□□ -1.25
LDHA-223ENST00000545215 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 ZNF451Q9Y4E5 1061 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 BACE2Q9Y5Z0 518 aa7.25□□□□□ -1.25
LDHA-223ENST00000545215 NUP210Q8TEM1 1887 aaPredicted RBP7.24□□□□□ -1.25
LDHA-223ENST00000545215 SMCO2A6NFE2 343 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 H3BQV1 296 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 SGK1O00141 431 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 CBX4O00257 560 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 N4BP3O15049 544 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 PAPSS1O43252 624 aaPredicted RBP7.24□□□□□ -1.25
LDHA-223ENST00000545215 JAK2O60674 1132 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 SEC24AO95486 1093 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 CELA2BP08218 269 aaPredicted RBP7.24□□□□□ -1.25
LDHA-223ENST00000545215 PABPC1P11940 636 aaKnown RBP7.24□□□□□ -1.25
LDHA-223ENST00000545215 ARSAP15289 507 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 GNLYP22749 145 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 MLH1P40692 756 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 RAC1P63000 192 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 SUMO1P63165 101 aaKnown RBP7.24□□□□□ -1.25
LDHA-223ENST00000545215 MORC3Q14149 939 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 UBXN11Q5T124 520 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 DYMQ7RTS9 669 aa7.24□□□□□ -1.25
LDHA-223ENST00000545215 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.24□□□□□ -1.25
LDHA-223ENST00000545215 DDX42Q86XP3 938 aaKnown RBP eCLIP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms