RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CCDC26Q8TAB7 109 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 KCTD13Q8WZ19 329 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 TFAP2BQ92481 460 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 CD101Q93033 1021 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 HSFY1Q96LI6 401 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 KREMEN1Q96MU8 473 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 P2RY13Q9BPV8 354 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 NAT10Q9H0A0 1025 aaKnown RBP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 NUCKS1Q9H1E3 243 aaKnown RBP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 LINC00597Q9H2U6 94 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 NMUR1Q9HB89 426 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 BRD7Q9NPI1 651 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 CNGB3Q9NQW8 809 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 FBXO4Q9UKT5 387 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 STRIP2Q9ULQ0 834 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.73□□□□□ -1.17
CPSF7-224ENST00000544990 CNTN6Q9UQ52 1028 aa7.73□□□□□ -1.17
CPSF7-224ENST00000544990 CACNA1IQ9P0X4 2223 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 MYOFQ9NZM1 2061 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 OTOL1A6NHN0 477 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 THAP12O43422 761 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ATG13O75143 517 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 LETM1O95202 739 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 TBX18O95935 607 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SP9P0CG40 484 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 IRF1P10914 325 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 LCP1P13796 627 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 PTMSP20962 102 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 CDK11BP21127 795 aaKnown RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 GNA15P30679 374 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 NBL1P41271 181 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ACADSBP45954 432 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 CXCL12P48061 93 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 PGFP49763 221 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 GALK1P51570 392 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF132P52740 706 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 NRLP54845 237 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 YWHAGP61981 247 aaKnown RBP eCLIP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 CSTF1Q05048 431 aaKnown RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 GAD2Q05329 585 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ADIGQ0VDE8 80 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 MTAPQ13126 283 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 CCINQ13939 588 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 DHCR24Q15392 516 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 MEA1Q16626 185 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF528Q3MIS6 628 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 FBXO43Q4G163 708 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 PREPLQ4J6C6 727 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 MIIPQ5JXC2 388 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 HTR3DQ70Z44 454 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SCD5Q86SK9 330 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SCML4Q8N228 414 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SPEM1Q8N4L4 309 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 RNF139Q8WU17 664 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SLC35F5Q8WV83 523 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF606Q8WXB4 792 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 GOLGA1Q92805 767 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SECISBP2LQ93073 1101 aaKnown RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 FAM126AQ9BYI3 521 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ULBP1Q9BZM6 244 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 DCLK3Q9C098 648 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SEMA4AQ9H3S1 761 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ABCC13Q9NSE7 274 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 OLA1Q9NTK5 396 aaKnown RBP7.72□□□□□ -1.17
CPSF7-224ENST00000544990 FAM86C1Q9NVL1 165 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 OSER1Q9NX31 292 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 RASAL2Q9UJF2 1139 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 DNAJC12Q9UKB3 198 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 NUDT5Q9UKK9 219 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ZNF510Q9Y2H8 683 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 PCDHGC4Q9Y5F7 938 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 ATG2BQ96BY7 2078 aa7.72□□□□□ -1.17
CPSF7-224ENST00000544990 SLC35F4A4IF30 521 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 SMTNL1A8MU46 457 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-224ENST00000544990 PROB1E7EW31 1015 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 TULP2O00295 520 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 SART1O43290 800 aaKnown RBP7.71□□□□□ -1.18
CPSF7-224ENST00000544990 FBXO21O94952 628 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 CYP17A1P05093 508 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 ADH5P11766 374 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 EIF2DP41214 584 aaKnown RBP7.71□□□□□ -1.18
CPSF7-224ENST00000544990 RGS7P49802 495 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 SNX16P57768 344 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 BPIFB4P59827 614 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 MYL5Q02045 173 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 TYRO3Q06418 890 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 EFEMP1Q12805 493 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 FKBP15Q5T1M5 1219 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 BSPRYQ5W0U4 402 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 ALG1LQ6GMV1 187 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 FSTL4Q6MZW2 842 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 PMF1Q6P1K2 205 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 GJB7Q6PEY0 223 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 FOXR1Q6PIV2 292 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 RHBDF2Q6PJF5 856 aa7.71□□□□□ -1.18
CPSF7-224ENST00000544990 C11orf57Q6ZUT1 292 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-224ENST00000544990 ALYREFQ86V81 257 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms