RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ABHD2P08910 425 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 EEF1B2P24534 225 aaKnown RBP13.21□□□□□ -0.3
PDZD4-209ENST00000544474 PPARGP37231 505 aaPredicted RBP13.21□□□□□ -0.3
PDZD4-209ENST00000544474 GLRBP48167 497 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 NME5P56597 212 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 MAMLD1Q13495 774 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 MTERF2Q49AM1 385 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 PPM1LQ5SGD2 360 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 ATG16L1Q676U5 607 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.3
PDZD4-209ENST00000544474 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 FBXL8Q96CD0 374 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.3
PDZD4-209ENST00000544474 OSBPL6Q9BZF3 934 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 EPS8L2Q9H6S3 715 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 GPAMQ9HCL2 828 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 XAB2Q9HCS7 855 aaKnown RBP13.21□□□□□ -0.3
PDZD4-209ENST00000544474 N6AMT1Q9Y5N5 214 aa13.21□□□□□ -0.3
PDZD4-209ENST00000544474 MCF2LO15068 1137 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 PRPF4O43172 522 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 HLA-DRAP01903 254 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 CDH3P22223 829 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 MSLNQ13421 630 aaPredicted RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 EEPD1Q7L9B9 569 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 CHST15Q7LFX5 561 aaPredicted RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 CPT1BQ92523 772 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 IMPG2Q9BZV3 1241 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 MRPL46Q9H2W6 279 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 SNX13Q9Y5W8 968 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 KDM1AO60341 852 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 HSPA8P11142 646 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 YWHABP31946 246 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 CDH6P55285 790 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 XIAPP98170 497 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 PFKPQ01813 784 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 FASTKD1Q53R41 847 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 PCDH20Q8N6Y1 951 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 ZNF512Q96ME7 567 aaPredicted RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 RBM38Q9H0Z9 239 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 KCNH7Q9NS40 1196 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 RSL24D1Q9UHA3 163 aaKnown RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 PSTPIP1O43586 416 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 MGEA5O60502 916 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 HSPA4LO95757 839 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 CLIC3O95833 236 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 MYCLP1P12525 358 aaPredicted RBP13.2□□□□□ -0.3
PDZD4-209ENST00000544474 GPC3P51654 580 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 DNAL1Q4LDG9 190 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 ZNF786Q8N393 782 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 FEZF2Q8TBJ5 459 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 DCUN1D1Q96GG9 259 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 RIT2Q99578 217 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 AURKCQ9UQB9 309 aa13.2□□□□□ -0.3
PDZD4-209ENST00000544474 AP1G1O43747 822 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 CNOT3O75175 753 aaKnown RBP13.19□□□□□ -0.3
PDZD4-209ENST00000544474 GRIA1P42261 906 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 PHKA2P46019 1235 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 POTEHQ6S545 545 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SIX5Q8N196 739 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 BANPQ8N9N5 519 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 EXD1Q8NHP7 514 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 ANKRD36BP1Q96IX9 119 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SENP6Q9GZR1 1112 aaPredicted RBP13.19□□□□□ -0.3
PDZD4-209ENST00000544474 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
PDZD4-209ENST00000544474 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 NOX1Q9Y5S8 564 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 KIF13BQ9NQT8 1826 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 A0A0B4J269 797 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 ART3Q13508 389 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SNRNP48Q6IEG0 339 aaKnown RBP13.19□□□□□ -0.3
PDZD4-209ENST00000544474 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 ENOSF1Q7L5Y1 443 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 C12orf56Q8IXR9 622 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 CCNYL1Q8N7R7 359 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 HAUS8Q9BT25 410 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 TBX20Q9UMR3 447 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
PDZD4-209ENST00000544474 ALOX15BO15296 676 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 TNFAIP8O95379 198 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
PDZD4-209ENST00000544474 CCR10P46092 362 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 NR1H2P55055 460 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 NUP107P57740 925 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 ZBTB41Q5SVQ8 909 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms