RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 PWWP2AQ96N64 755 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 ZNF558Q96NG5 402 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 ARHGEF38Q9NXL2 777 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 SHOC2Q9UQ13 582 aa20.53■□□□□ 0.88
COPS7A-218ENST00000543939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 DCLK1O15075 740 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 RIPK2O43353 540 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 RTN3O95197 1032 aaPredicted RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 ACRP10323 421 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 ZNF135P52742 658 aaPredicted RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 NRLP54845 237 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 DUSP4Q13115 394 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 PAFAH1B3Q15102 231 aaKnown RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 SLC45A4Q5BKX6 768 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 CEP85LQ5SZL2 805 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 SPOUT1Q5T280 376 aaKnown RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 MSANTD2Q6P1R3 559 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 DENND5BQ6ZUT9 1274 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 RELL1Q8IUW5 271 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 PRCCQ92733 491 aaPredicted RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 OLFM3Q96PB7 478 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 SEPT5Q99719 369 aaPredicted RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 CDC42EP4Q9H3Q1 356 aaKnown RBP20.52■□□□□ 0.88
COPS7A-218ENST00000543939 COMMD8Q9NX08 183 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 GMIPQ9P107 970 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 VPS18Q9P253 973 aa20.52■□□□□ 0.88
COPS7A-218ENST00000543939 KIAA1671Q9BY89 1806 aa20.52■□□□□ 0.87
COPS7A-218ENST00000543939 WDR27A2RRH5 827 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 KCNN4O15554 427 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 BAIAP3O94812 1187 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 SOD2P04179 222 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 YWHAQP27348 245 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 EIF3BP55884 814 aaKnown RBP20.51■□□□□ 0.87
COPS7A-218ENST00000543939 SLC29A2Q14542 456 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 TTMPQ5BVD1 217 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 BRMS1LQ5PSV4 323 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 UBAP2Q5T6F2 1119 aaKnown RBP20.51■□□□□ 0.87
COPS7A-218ENST00000543939 DENND2CQ68D51 928 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 CEP128Q6ZU80 1094 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 BZW1Q7L1Q6 419 aaKnown RBP20.51■□□□□ 0.87
COPS7A-218ENST00000543939 GPR152Q8TDT2 470 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 CPT1BQ92523 772 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 QKIQ96PU8 341 aaKnown RBP eCLIP20.51■□□□□ 0.87
COPS7A-218ENST00000543939 OSBPL2Q9H1P3 480 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 SFMBT1Q9UHJ3 866 aa20.51■□□□□ 0.87
COPS7A-218ENST00000543939 MRPL42Q9Y6G3 142 aaKnown RBP20.51■□□□□ 0.87
COPS7A-218ENST00000543939 MFSD11O43934 449 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 HSPA1AP0DMV8 641 aaKnown RBP20.5■□□□□ 0.87
COPS7A-218ENST00000543939 HSPA1BP0DMV9 641 aaKnown RBP20.5■□□□□ 0.87
COPS7A-218ENST00000543939 TPI1P60174 286 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 RPL10AP62906 217 aaKnown RBP20.5■□□□□ 0.87
COPS7A-218ENST00000543939 BTG3Q14201 252 aaPredicted RBP20.5■□□□□ 0.87
COPS7A-218ENST00000543939 HOOK3Q86VS8 718 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 PPIL6Q8IXY8 311 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 RNF34Q969K3 372 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 TMBIM4Q9HC24 238 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 IL23AQ9NPF7 189 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 DNAJC17Q9NVM6 304 aaKnown RBP20.5■□□□□ 0.87
COPS7A-218ENST00000543939 PCDH10Q9P2E7 1040 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 HACD1B0YJ81 288 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 RPL17P18621 184 aaKnown RBP20.5■□□□□ 0.87
COPS7A-218ENST00000543939 LAG3P18627 525 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 OR1D2P34982 312 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 KIAA1841Q6NSI8 718 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 NAT8LQ8N9F0 302 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 COLGALT1Q8NBJ5 622 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 FBXO32Q969P5 355 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 CLSTN3Q9BQT9 956 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 HERC2P3Q9BVR0 1158 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 TMEM51Q9NW97 253 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 PAK5Q9P286 719 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 OR12D3Q9UGF7 316 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 NUDT5Q9UKK9 219 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 SNX10Q9Y5X0 201 aa20.5■□□□□ 0.87
COPS7A-218ENST00000543939 MSI1O43347 362 aaKnown RBP20.49■□□□□ 0.87
COPS7A-218ENST00000543939 SHBGP04278 402 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 ERCC2P18074 760 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 DSG1Q02413 1049 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 PPP2R5DQ14738 602 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 ANKRD22Q5VYY1 191 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 LRRN4Q8WUT4 740 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 TMEM169Q96HH4 297 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 SERPINB11Q96P15 392 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 HAPLN3Q96S86 360 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 RBM15Q96T37 977 aaKnown RBP eCLIP20.49■□□□□ 0.87
COPS7A-218ENST00000543939 EPAS1Q99814 870 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 CLIC5Q9NZA1 410 aa20.49■□□□□ 0.87
COPS7A-218ENST00000543939 ALPK3Q96L96 1907 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 CARNS1A5YM72 827 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 SMAPO00193 183 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 TTC4O95801 387 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 ATF6P18850 670 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 CCR1P32246 355 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 UBE2Q1Q7Z7E8 422 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 CEP295NLQ96MC4 621 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 SPG21Q9NZD8 308 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 NINJ2Q9NZG7 142 aa20.48■□□□□ 0.87
COPS7A-218ENST00000543939 C2CD2LO14523 706 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 LRIG2O94898 1065 aa20.47■□□□□ 0.87
COPS7A-218ENST00000543939 MYZAPP0CAP1 466 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms