RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 AZIN2Q96A70 460 aa19.5■□□□□ 0.71
LTBR-211ENST00000543190 DHTKD1Q96HY7 919 aaPredicted RBP19.5■□□□□ 0.71
LTBR-211ENST00000543190 HSPA12BQ96MM6 686 aa19.5■□□□□ 0.71
LTBR-211ENST00000543190 ULBP1Q9BZM6 244 aa19.5■□□□□ 0.71
LTBR-211ENST00000543190 PRDM16Q9HAZ2 1276 aa19.5■□□□□ 0.71
LTBR-211ENST00000543190 HOOK1Q9UJC3 728 aaKnown RBP19.5■□□□□ 0.71
LTBR-211ENST00000543190 CYP8B1Q9UNU6 501 aa19.5■□□□□ 0.71
LTBR-211ENST00000543190 WASH3PC4AMC7 463 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 TULP2O00295 520 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 IGLV3-27P01718 113 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 NCAM1P13591 858 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 HOXD9P28356 352 aaPredicted RBP19.49■□□□□ 0.71
LTBR-211ENST00000543190 IL12RB1P42701 662 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 RPL34P49207 117 aaKnown RBP19.49■□□□□ 0.71
LTBR-211ENST00000543190 FMO5P49326 533 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 HARS2P49590 506 aaKnown RBP19.49■□□□□ 0.71
LTBR-211ENST00000543190 RING1Q06587 406 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 CAMK2GQ13555 558 aaPredicted RBP19.49■□□□□ 0.71
LTBR-211ENST00000543190 WDR45BQ5MNZ6 344 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 ADGRF1Q5T601 910 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 TCERG1LQ5VWI1 586 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 BSPRYQ5W0U4 402 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 TRIML1Q8N9V2 468 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 FBRSQ9HAH7 460 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 LRRC4Q9HBW1 653 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 CIZ1Q9ULV3 898 aaPredicted RBP19.49■□□□□ 0.71
LTBR-211ENST00000543190 SPEGQ15772 3267 aa19.49■□□□□ 0.71
LTBR-211ENST00000543190 SLC12A8A0AV02 714 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 YJEFN3A6XGL0 299 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 E7ENQ6 273 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 H0Y626 953 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 PSMA7O14818 248 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 TRIM16O95361 564 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 CFIP05156 583 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 KCNA4P22459 653 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 COPAP53621 1224 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 DAOAP59103 153 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 ZNF234Q14588 700 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 CNGA2Q16280 664 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 MEA1Q16626 185 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 GOLGA7BQ2TAP0 167 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 TMEM215Q68D42 235 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 FMNL3Q8IVF7 1028 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 ZNF557Q8N988 423 aaPredicted RBP19.48■□□□□ 0.71
LTBR-211ENST00000543190 LMO3Q8TAP4 145 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 WFIKKN2Q8TEU8 576 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 SMARCE1Q969G3 411 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
LTBR-211ENST00000543190 TMEM245Q9H330 911 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 RAD54BQ9Y620 910 aa19.48■□□□□ 0.71
LTBR-211ENST00000543190 FREM2Q5SZK8 3169 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 OPHN1O60890 802 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 NDUFS2O75306 463 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 ZNF883P0CG24 379 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 CD59P13987 128 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 GNSP15586 552 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 TPMTP51580 245 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 MARSP56192 900 aaKnown RBP19.47■□□□□ 0.71
LTBR-211ENST00000543190 NUCB2P80303 420 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 GCNT1Q02742 428 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 ADIGQ0VDE8 80 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 NNTQ13423 1086 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 DCAF17Q5H9S7 520 aaPredicted RBP19.47■□□□□ 0.71
LTBR-211ENST00000543190 UNQ6494/PRO21346Q6UXR6 183 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 TMPRSS6Q8IU80 811 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 HDDC3Q8N4P3 179 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 MINDY1Q8N5J2 469 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 DEFB124Q8NES8 71 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 GATA6Q92908 595 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 BHMTQ93088 406 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 HSFY1Q96LI6 401 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 ADAM33Q9BZ11 813 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 CLEC4EQ9ULY5 219 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.47■□□□□ 0.71
LTBR-211ENST00000543190 CNTN6Q9UQ52 1028 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 NEUROG3Q9Y4Z2 214 aa19.47■□□□□ 0.71
LTBR-211ENST00000543190 ATXN2Q99700 1313 aaKnown RBP19.47■□□□□ 0.71
LTBR-211ENST00000543190 ZFYVE26Q68DK2 2539 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 IRAK2O43187 625 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 GABBR2O75899 941 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 HLA-FP30511 346 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 MAPK8P45983 427 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 ATXN3P54252 364 aaPredicted RBP19.46■□□□□ 0.71
LTBR-211ENST00000543190 ZBTB16Q05516 673 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 STIM1Q13586 685 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 UAP1L1Q3KQV9 507 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 BEND5Q7L4P6 421 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 C1orf216Q8TAB5 229 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 DDI1Q8WTU0 396 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 RNF139Q8WU17 664 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 OSGEPQ9NPF4 335 aa19.46■□□□□ 0.71
LTBR-211ENST00000543190 KNTC1P50748 2209 aa19.45■□□□□ 0.7
LTBR-211ENST00000543190 ACACAQ13085 2346 aa19.45■□□□□ 0.7
LTBR-211ENST00000543190 A0A1B0GTW7 788 aa19.45■□□□□ 0.7
LTBR-211ENST00000543190 TRIM49BA6NDI0 452 aa19.45■□□□□ 0.7
LTBR-211ENST00000543190 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
LTBR-211ENST00000543190 METTL12A8MUP2 240 aa19.45■□□□□ 0.7
LTBR-211ENST00000543190 KCNJ18B7U540 433 aa19.45■□□□□ 0.7
LTBR-211ENST00000543190 SYNCRIPO60506 623 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms