RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 HCN4Q9Y3Q4 1203 aa5.34□□□□□ -1.55
SNHG1-218ENST00000541615 TBX22Q9Y458 520 aa5.34□□□□□ -1.55
SNHG1-218ENST00000541615 PCDHB5Q9Y5E4 795 aa5.34□□□□□ -1.55
SNHG1-218ENST00000541615 CPQQ9Y646 472 aa5.34□□□□□ -1.55
SNHG1-218ENST00000541615 KCNE2Q9Y6J6 123 aa5.34□□□□□ -1.55
SNHG1-218ENST00000541615 MAST1Q9Y2H9 1570 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 DUOX2Q9NRD8 1548 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MROH5Q6ZUA9 1318 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 A0A087WXM4 84 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PNMA6EA0A0J9YXQ4 647 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 LOC390937A0A1W2PQ73 354 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 A0A1W2PQJ5 194 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 HEATR9A2RTY3 570 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ACOD1A6NK06 481 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF487B1APH4 448 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CLDN25C9JDP6 229 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 F8W036 122 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 H3BUI4 141 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MSI1O43347 362 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 WIPF1O43516 503 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PTP4A3O75365 173 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 DXOO77932 396 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 SLITRK5O94991 958 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TGM6O95932 706 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 GNRH1P01148 92 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ALBP02768 609 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 GSNP06396 782 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TFPTP0C1Z6 253 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 HSMCR30P0CW71 290 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TRAPPC2P0DI81 140 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TRAPPC2BP0DI82 140 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 THRAP10827 490 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 DBTP11182 482 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 SMPD1P17405 629 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 GARTP22102 1010 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RPS6KB1P23443 525 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RPA1P27694 616 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CDC27P30260 824 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 NMT1P30419 496 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RCVRNP35243 200 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ADD2P35612 726 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PGM1P36871 562 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 FDFT1P37268 417 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ATP5OP48047 213 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 NPY2RP49146 381 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 NEK3P51956 506 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MAPK12P53778 367 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 NCKAP1LP55160 1127 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TPTEP56180 551 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CTDSPL2Q05D32 466 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 SSRP1Q08945 709 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ITGADQ13349 1161 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 THOC5Q13769 683 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ERV3-1Q14264 604 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CLCA4Q14CN2 919 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 FASTKD3Q14CZ7 662 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MORF4L2Q15014 288 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TAF5Q15542 800 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 UAP1Q16222 522 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF568Q3ZCX4 644 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ARSHQ5FYA8 562 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 FIGNQ5HY92 759 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 FAM209BQ5JX69 171 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RTP2Q5QGT7 225 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RARS2Q5T160 578 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF618Q5T7W0 954 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ATG16L1Q676U5 607 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 NANOGP8Q6NSW7 305 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CFAP161Q6P656 301 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 IYDQ6PHW0 289 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 C11orf88Q6PI97 169 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ARSKQ6UWY0 536 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MPRIPQ6WCQ1 1025 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ZYG11AQ6WRX3 759 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 UNC5AQ6ZN44 842 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TLK2Q86UE8 772 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 JAZF1Q86VZ6 243 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RIOX2Q8IUF8 465 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MICU2Q8IYU8 434 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CCDC33Q8N5R6 958 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 METTL25Q8N6Q8 603 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 UBL4BQ8N7F7 174 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PLD5Q8N7P1 536 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 FNDC5Q8NAU1 212 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TSPAN14Q8NG11 270 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 OR6C4Q8NGE1 309 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TBC1D15Q8TC07 691 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ACTRT1Q8TDG2 376 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 EPS8L1Q8TE68 723 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 SETD7Q8WTS6 366 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PIK3R3Q92569 461 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RAB7BQ96AH8 199 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MCRS1Q96EZ8 462 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF594Q96JF6 807 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 BTBD6Q96KE9 485 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TMEM68Q96MH6 324 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 QKIQ96PU8 341 aaKnown RBP eCLIP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms