RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TJP3O95049 919 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 PAPLNO95428 1278 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 RDXP35241 583 aaKnown RBP28.84■■■□□ 2.21
CCM2-218ENST00000541586 CDH6P55285 790 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 TFF2Q03403 129 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 SLC5A9Q2M3M2 681 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 ERMARDQ5T6L9 678 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 TTC27Q6P3X3 843 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 LRRC19Q9H756 370 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.84■■■□□ 2.217e-6■□□□□ 10.1
CCM2-218ENST00000541586 COMMD8Q9NX08 183 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 GMIPQ9P107 970 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 SCML2Q9UQR0 700 aa28.84■■■□□ 2.21
CCM2-218ENST00000541586 R3HDM2Q9Y2K5 976 aaKnown RBP28.84■■■□□ 2.21
CCM2-218ENST00000541586 MRPS23Q9Y3D9 190 aaKnown RBP28.84■■■□□ 2.21
CCM2-218ENST00000541586 USP15Q9Y4E8 981 aaPredicted RBP28.84■■■□□ 2.21
CCM2-218ENST00000541586 SYNJ2BP-COX16A0A087WUM0 186 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 HEXIM1O94992 359 aaKnown RBP28.83■■■□□ 2.21
CCM2-218ENST00000541586 ZC3H12AQ5D1E8 599 aaKnown RBP28.83■■■□□ 2.21
CCM2-218ENST00000541586 MAATS1Q7Z4T9 603 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 FAM131BQ86XD5 332 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 TRIM62Q9BVG3 475 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 CALN1Q9BXU9 219 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 IL21Q9HBE4 155 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 WDR6Q9NNW5 1121 aaKnown RBP28.83■■■□□ 2.21
CCM2-218ENST00000541586 RRN3Q9NYV6 651 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 TRPM5Q9NZQ8 1165 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 COX16Q9P0S2 106 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 EFR3BQ9Y2G0 817 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 NRG2O14511 850 aaPredicted RBP28.83■■■□□ 2.21
CCM2-218ENST00000541586 F11P03951 625 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 PGFP49763 221 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 YWHAGP61981 247 aaKnown RBP eCLIP28.83■■■□□ 2.21
CCM2-218ENST00000541586 DEUP1Q05D60 604 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 NME3Q13232 169 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 CA9Q16790 459 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 BEND5Q7L4P6 421 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 CCDC185Q8N715 623 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 ITFG1Q8TB96 612 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 ADAM32Q8TC27 787 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 ING5Q8WYH8 240 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 ATG4AQ8WYN0 398 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 RUBCNQ92622 972 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 GCNAQ96QF7 691 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 PIGVQ9NUD9 493 aa28.83■■■□□ 2.21
CCM2-218ENST00000541586 C2orf16Q68DN1 1984 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 GREB1Q4ZG55 1949 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 ZNF197O14709 1029 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 TTI1O43156 1089 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 COILP38432 576 aaPredicted RBP28.82■■■□□ 2.2
CCM2-218ENST00000541586 MTHFRP42898 656 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 CYP4F8P98187 520 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 DPYSL3Q14195 570 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 CCDC137Q6PK04 289 aaKnown RBP28.82■■■□□ 2.2
CCM2-218ENST00000541586 SCD5Q86SK9 330 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 TMEM150AQ86TG1 271 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 LEMD2Q8NC56 503 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 PGAP3Q96FM1 320 aaPredicted RBP28.82■■■□□ 2.2
CCM2-218ENST00000541586 DCLK3Q9C098 648 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 ARGLU1Q9NWB6 273 aaPredicted RBP28.82■■■□□ 2.2
CCM2-218ENST00000541586 PCYOX1Q9UHG3 505 aa28.82■■■□□ 2.2
CCM2-218ENST00000541586 GRXCR2A6NFK2 248 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 FSHRP23945 695 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 MCM3P25205 808 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 CDC25CP30307 473 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 FNTAP49354 379 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 EPHA5P54756 1037 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 DR1Q01658 176 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 KRT81Q14533 505 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 PDK2Q15119 407 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 GET4Q7L5D6 327 aaPredicted RBP28.81■■■□□ 2.2
CCM2-218ENST00000541586 MAP7D3Q8IWC1 876 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 POMKQ9H5K3 350 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 TLR8Q9NR97 1041 aaKnown RBP28.81■■■□□ 2.2
CCM2-218ENST00000541586 AP4E1Q9UPM8 1137 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 CLUHO75153 1309 aa28.81■■■□□ 2.2
CCM2-218ENST00000541586 A0A1W2PQH9 124 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 FAM92AA1XBS5 289 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 ZSCAN5CA6NGD5 496 aaPredicted RBP28.8■■■□□ 2.2
CCM2-218ENST00000541586 MBTPS2O43462 519 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 GUCY2DQ02846 1103 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 MMRN1Q13201 1228 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 DHX34Q14147 1143 aaKnown RBP28.8■■■□□ 2.2
CCM2-218ENST00000541586 CBX2Q14781 532 aaPredicted RBP28.8■■■□□ 2.2
CCM2-218ENST00000541586 BRD3Q15059 726 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 MON1AQ86VX9 555 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 SHKBP1Q8TBC3 707 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 PCDH18Q9HCL0 1135 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 HOMER3Q9NSC5 361 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 ABCC13Q9NSE7 274 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 ZNF638Q14966 1978 aaKnown RBP28.8■■■□□ 2.2
CCM2-218ENST00000541586 FGF19O95750 216 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 CLCN6P51797 869 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 SMAD4Q13485 552 aaKnown RBP28.8■■■□□ 2.2
CCM2-218ENST00000541586 SNX1Q13596 522 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 TEAD2Q15562 447 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 CCNG2Q16589 344 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 KCTD19Q17RG1 926 aaPredicted RBP28.8■■■□□ 2.2
CCM2-218ENST00000541586 PRSS36Q5K4E3 855 aa28.8■■■□□ 2.2
CCM2-218ENST00000541586 BTBD8Q5XKL5 378 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms