RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 MAGED2Q9UNF1 606 aaPredicted RBP4.52□□□□□ -1.69
KNTC1-211ENST00000541427 SCAF8Q9UPN6 1271 aaKnown RBP4.52□□□□□ -1.69
KNTC1-211ENST00000541427 LRCH1Q9Y2L9 728 aa4.52□□□□□ -1.69
KNTC1-211ENST00000541427 PNMA6EA0A0J9YXQ4 647 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.51□□□□□ -1.69
KNTC1-211ENST00000541427 GXYLT2A0PJZ3 443 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 GOLGA6L3A6NEY3 463 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 C16orf96A6NNT2 1141 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 TMEM232C9JQI7 657 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 NPC1O15118 1278 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 ITGA5P08648 1049 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 KLRK1P26718 216 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 EPHB2P29323 1055 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 WDR5P61964 334 aaKnown RBP4.51□□□□□ -1.69
KNTC1-211ENST00000541427 SRSF4Q08170 494 aaKnown RBP4.51□□□□□ -1.69
KNTC1-211ENST00000541427 SEMA3BQ13214 749 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 GAB1Q13480 694 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 P3H1Q32P28 736 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 C4orf46Q504U0 113 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 C16orf89Q6UX73 402 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 RANBP10Q6VN20 620 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 ZNF527Q8NB42 609 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 OR1N1Q8NGS0 311 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 FAM71BQ8TC56 605 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 POF1BQ8WVV4 589 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 WASF1Q92558 559 aa4.51□□□□□ -1.69
KNTC1-211ENST00000541427 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
KNTC1-211ENST00000541427 QTRT1Q9BXR0 403 aaKnown RBP4.51□□□□□ -1.69
KNTC1-211ENST00000541427 EIF4G3O43432 1585 aaKnown RBP4.51□□□□□ -1.69
KNTC1-211ENST00000541427 AQRO60306 1485 aaKnown RBP eCLIP4.5□□□□□ -1.69
KNTC1-211ENST00000541427 FHAD1B1AJZ9 1412 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 TUBB4AP04350 444 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 IGHMBP2P38935 993 aaKnown RBP4.5□□□□□ -1.69
KNTC1-211ENST00000541427 GSTM5P46439 218 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 JAK3P52333 1124 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 PTK2BQ14289 1009 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 PUM3Q15397 648 aaKnown RBP4.5□□□□□ -1.69
KNTC1-211ENST00000541427 PFKFB4Q16877 469 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 SUPT20HL1Q3ZLR7 823 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 TMEM63BQ5T3F8 832 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 ACSM6Q6P461 480 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 VSTM1Q6UX27 236 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 ZNF813Q6ZN06 617 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 SLC22A17Q8WUG5 538 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 OVCA2Q8WZ82 227 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 HIC2Q96JB3 615 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 ADGRE3Q9BY15 652 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 CDCP1Q9H5V8 836 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 KLHL13Q9P2N7 655 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 CFAP43Q8NDM7 1665 aa4.5□□□□□ -1.69
KNTC1-211ENST00000541427 GRIN2BQ13224 1484 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 F5H423 210 aaPredicted RBP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 PPP6CO00743 305 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 PRYO14603 147 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 RRHO14718 337 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 DNPH1O43598 174 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 CER1O95813 267 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 SFPQP23246 707 aaKnown RBP eCLIP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 CERS1P27544 350 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 DUSP1P28562 367 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 ALDH18A1P54886 795 aaKnown RBP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 CSHL1Q14406 222 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 KPNB1Q14974 876 aaKnown RBP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 ELF2Q15723 593 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 TRIM71Q2Q1W2 868 aaKnown RBP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 TUBB8Q3ZCM7 444 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 ZACNQ401N2 412 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 KIAA1614Q5VZ46 1190 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 LIN54Q6MZP7 749 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 PGBD2Q6P3X8 592 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 KYAT3Q6YP21 454 aaKnown RBP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 YTHDF3Q7Z739 585 aaKnown RBP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 NEK8Q86SG6 692 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 GATAD2AQ86YP4 633 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 GALNT16Q8N428 558 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 OR52L2PQ8NGH6 319 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 RPS6KC1Q96S38 1066 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 PAAF1Q9BRP4 392 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 SEMA4CQ9C0C4 833 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 TP63Q9H3D4 680 aaPredicted RBP4.49□□□□□ -1.69
KNTC1-211ENST00000541427 KCNK9Q9NPC2 374 aa4.49□□□□□ -1.69
KNTC1-211ENST00000541427 SPATA31A1Q5TZJ5 1347 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 WDR17Q8IZU2 1322 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 ZNF608Q9ULD9 1512 aaPredicted RBP4.48□□□□□ -1.69
KNTC1-211ENST00000541427 LOC105369274A0A096LPK9 316 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 LOC102723532A0A0G2JNH3 316 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 SMIM35A0A1B0GVV1 85 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 M0QYT0 321 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 SYT5O00445 386 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 PEX14O75381 377 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 SKAP2O75563 359 aaPredicted RBP4.48□□□□□ -1.69
KNTC1-211ENST00000541427 RPP40O75818 363 aaKnown RBP4.48□□□□□ -1.69
KNTC1-211ENST00000541427 PRR35P0CG20 571 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 MATN1P21941 496 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 MMP8P22894 467 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 NDUFS1P28331 727 aa4.48□□□□□ -1.69
KNTC1-211ENST00000541427 SSBP2P81877 361 aaPredicted RBP4.48□□□□□ -1.69
KNTC1-211ENST00000541427 CHAF1AQ13111 956 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms