RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 A0A1B0GVM2 712 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 A0A1W2PR77 199 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 TLR5O60602 858 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 WNT1P04628 370 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 ITGB3P05106 788 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 LIPCP11150 499 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 ACOT2P49753 483 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.82
YBX3-211ENST00000541351 NCKAP1LP55160 1127 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 PSMC1P62191 440 aaKnown RBP9.96□□□□□ -0.82
YBX3-211ENST00000541351 RPS14P62263 151 aaKnown RBP9.96□□□□□ -0.82
YBX3-211ENST00000541351 RBP5P82980 135 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 TFAMQ00059 246 aaKnown RBP9.96□□□□□ -0.82
YBX3-211ENST00000541351 MAPK7Q13164 816 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 KCNAB2Q13303 367 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 NAA30Q147X3 362 aaPredicted RBP9.96□□□□□ -0.82
YBX3-211ENST00000541351 POSTNQ15063 836 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 HIST2H2BCQ6DN03 193 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 NAPEPLDQ6IQ20 393 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 TMC6Q7Z403 805 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 DSG4Q86SJ6 1040 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 WFIKKN2Q8TEU8 576 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 BHMTQ93088 406 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 ATXN7L3BQ96GX2 97 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 OMDQ99983 421 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 OSBPL2Q9H1P3 480 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 TMEM60Q9H2L4 133 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 FBXO44Q9H4M3 255 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 RTN4Q9NQC3 1192 aaKnown RBP9.96□□□□□ -0.82
YBX3-211ENST00000541351 CYLDQ9NQC7 956 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 FBXL12Q9NXK8 326 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 PLK2Q9NYY3 685 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 NLGN3Q9NZ94 848 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 CHORDC1Q9UHD1 332 aaPredicted RBP9.96□□□□□ -0.82
YBX3-211ENST00000541351 ACSL6Q9UKU0 697 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 AGO2Q9UKV8 859 aaKnown RBP9.96□□□□□ -0.82
YBX3-211ENST00000541351 FZD4Q9ULV1 537 aa9.96□□□□□ -0.82
YBX3-211ENST00000541351 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
YBX3-211ENST00000541351 TRIM38O00635 465 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 VPS4BO75351 444 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 DDAH2O95865 285 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 PENKP01210 267 aaPredicted RBP9.95□□□□□ -0.82
YBX3-211ENST00000541351 ATP5BP06576 529 aaKnown RBP9.95□□□□□ -0.82
YBX3-211ENST00000541351 KRT19P08727 400 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 CD97P48960 835 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 GALCP54803 685 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 GNL2Q13823 731 aaKnown RBP9.95□□□□□ -0.82
YBX3-211ENST00000541351 STAT4Q14765 748 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 GEN1Q17RS7 908 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 NCEH1Q6PIU2 408 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 PRPF39Q86UA1 669 aaKnown RBP9.95□□□□□ -0.82
YBX3-211ENST00000541351 CSGALNACT2Q8N6G5 542 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 IFI44Q8TCB0 444 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 TNFRSF25Q93038 417 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 DCLK3Q9C098 648 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 STRADBQ9C0K7 418 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 SNX25Q9H3E2 840 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 VPS4AQ9UN37 437 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 DMTF1Q9Y222 760 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 CKAP5Q14008 2032 aa9.95□□□□□ -0.82
YBX3-211ENST00000541351 E9PMD0 336 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 K7ENM7 598 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 SDC3O75056 442 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 CDC45O75419 566 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 STK3Q13188 491 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 SOWAHAQ2M3V2 549 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 OSTM1Q86WC4 334 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 JAMLQ86YT9 394 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 MIB2Q96AX9 1013 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 APOLD1Q96LR9 279 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 CATSPER2Q96P56 530 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 CDK5RAP1Q96SZ6 601 aaKnown RBP9.94□□□□□ -0.82
YBX3-211ENST00000541351 KLF16Q9BXK1 252 aaPredicted RBP9.94□□□□□ -0.82
YBX3-211ENST00000541351 PABPC3Q9H361 631 aaKnown RBP9.94□□□□□ -0.82
YBX3-211ENST00000541351 ZNF768Q9H5H4 540 aaKnown RBP9.94□□□□□ -0.82
YBX3-211ENST00000541351 CRTAC1Q9NQ79 661 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 ODF2LQ9ULJ1 636 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 ENTPD2Q9Y5L3 495 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 ARID1BQ8NFD5 2236 aaPredicted RBP9.94□□□□□ -0.82
YBX3-211ENST00000541351 NUMA1Q14980 2115 aa9.94□□□□□ -0.82
YBX3-211ENST00000541351 PLD2O14939 933 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 FFAR2O15552 330 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 ATP2C2O75185 946 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 RNASEH2AO75792 299 aaKnown RBP9.93□□□□□ -0.82
YBX3-211ENST00000541351 FAM163BP0C2L3 166 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 TMEM191BP0C7N4 346 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 PLCG1P19174 1290 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 WARSP23381 471 aaKnown RBP9.93□□□□□ -0.82
YBX3-211ENST00000541351 DGKAP23743 735 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 SLC5A2P31639 672 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 ZNF445P59923 1031 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 ECM1Q16610 540 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 MDH1BQ5I0G3 518 aa9.93□□□□□ -0.82
YBX3-211ENST00000541351 KLHDC10Q6PID8 442 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms