RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RABGGTBP53611 331 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 BTKQ06187 659 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 LAMB3Q13751 1172 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PCLAFQ15004 111 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 LIN52Q52LA3 116 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 KCNT2Q6UVM3 1135 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PTAR1Q7Z6K3 402 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ACVR1CQ8NER5 493 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 MCRS1Q96EZ8 462 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 TMEM176AQ96HP8 235 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 GORASP1Q9BQQ3 440 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 KLC2Q9H0B6 622 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ASNSD1Q9NWL6 643 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PAK5Q9P286 719 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 KLF11O14901 512 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 DKC1O60832 514 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 SERPINA6P08185 405 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PFKMP08237 780 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ATP6V1B1P15313 513 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 NELFEP18615 380 aaKnown RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 HSPA1LP34931 641 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 SERPINB5P36952 375 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 IDH3AP50213 366 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 IRF9Q00978 393 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPP2R5DQ14738 602 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 TARBP2Q15633 366 aaKnown RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 STXBP2Q15833 593 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 C6orf163Q5TEZ5 329 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 NAPRTQ6XQN6 538 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 ACOT1Q86TX2 421 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 AGAP3Q96P47 875 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 SORT1Q99523 831 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 WDR55Q9H6Y2 383 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 IFT122Q9HBG6 1241 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
CDC42SE1-207ENST00000540998 PTPRFP10586 1907 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZBTB42B2RXF5 422 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 STX16-NPEPL1H3BU86 382 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 KRT38O76015 456 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 VAV1P15498 845 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 ITGAXP20702 1163 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 SAT1P21673 171 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 CYP2F1P24903 491 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 CRABP2P29373 138 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 GOLGA7BQ2TAP0 167 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 SLC9B1Q4ZJI4 515 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPP1R26Q5T8A7 1209 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 PDSS2Q86YH6 399 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 NIM1KQ8IY84 436 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 GSDMBQ8TAX9 411 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 PIWIL2Q8TC59 973 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 EBNA1BP2Q99848 306 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 CNPY3Q9BT09 278 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 TEX13BQ9BXU2 312 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 XPNPEP3Q9NQH7 507 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 HACL1Q9UJ83 578 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 EFR3BQ9Y2G0 817 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 NME7Q9Y5B8 376 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 GJA3Q9Y6H8 435 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 SCN1AP35498 2009 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 LCTP09848 1927 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 AIM2O14862 343 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 CILPO75339 1184 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 DPEP1P16444 411 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 PTPRAP18433 802 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 TCN1P20061 433 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 CALRP27797 417 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 RANBP1P43487 201 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 COPAP53621 1224 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 PKNOX1P55347 436 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 HDAC4P56524 1084 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 PITX1P78337 314 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZRSR2Q15696 482 aaKnown RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 CCDC185Q8N715 623 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 C7orf31Q8N865 590 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZNF781Q8N8C0 355 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZNF280CQ8ND82 737 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 FAM156AQ8NDB6 213 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 USP13Q92995 863 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 OR52B2Q96RD2 323 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 NDNQ99608 321 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 THAP1Q9NVV9 213 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 STK32BQ9NY57 414 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 APPL1Q9UKG1 709 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 POMPQ9Y244 141 aa10.68□□□□□ -0.7
CDC42SE1-207ENST00000540998 FAM159BA6NKW6 160 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 F8W8V4 182 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 CDK7P50613 346 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MAP3K10Q02779 954 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 MMEL1Q495T6 779 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 PDPK2PQ6A1A2 396 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZPBP2Q6X784 338 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 SNX31Q8N9S9 440 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 B4GALNT2Q8NHY0 566 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 FNIP1Q8TF40 1166 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 TRAPPC9Q96Q05 1148 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 APOL2Q9BQE5 337 aa10.67□□□□□ -0.7
CDC42SE1-207ENST00000540998 LHX5Q9H2C1 402 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms