RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 STX3Q13277 289 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 RCN1Q15293 331 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 PCBP1Q15365 356 aaKnown RBP eCLIP17.33■□□□□ 0.37
CACNB3-203ENST00000540990 ZNF467Q7Z7K2 595 aaPredicted RBP17.33■□□□□ 0.37
CACNB3-203ENST00000540990 GTF3C2Q8WUA4 911 aaPredicted RBP17.33■□□□□ 0.37
CACNB3-203ENST00000540990 DEPDC1BQ8WUY9 529 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 TFB1MQ8WVM0 346 aaKnown RBP17.33■□□□□ 0.37
CACNB3-203ENST00000540990 TSPAN18Q96SJ8 248 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 NAT9Q9BTE0 207 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 C20orf27Q9GZN8 174 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 ADAMTS10Q9H324 1103 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 NMRK1Q9NWW6 199 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 ZFATQ9P243 1243 aa17.33■□□□□ 0.37
CACNB3-203ENST00000540990 PPP1R1BQ9UD71 204 aaPredicted RBP17.33■□□□□ 0.37
CACNB3-203ENST00000540990 PPP1R12AO14974 1030 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-203ENST00000540990 OPHN1O60890 802 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 GLRA3O75311 464 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 KRT36O76013 467 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 NPTXRO95502 500 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 AOC1P19801 751 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 GRIA1P42261 906 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 GLUD2P49448 558 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 LBRQ14739 615 aaKnown RBP17.33■□□□□ 0.36
CACNB3-203ENST00000540990 GRIK4Q16099 956 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 INSCQ1MX18 579 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 DNAL1Q4LDG9 190 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 GJC2Q5T442 439 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-203ENST00000540990 MROH9Q5TGP6 573 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 SNX30Q5VWJ9 437 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 C9orf57Q5W0N0 161 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 MBLAC2Q68D91 279 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 SLC27A1Q6PCB7 646 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 NET1Q7Z628 596 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-203ENST00000540990 CCDC185Q8N715 623 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 KBTBD7Q8WVZ9 684 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 ARNTL2Q8WYA1 636 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 TRIM56Q9BRZ2 755 aaKnown RBP17.33■□□□□ 0.36
CACNB3-203ENST00000540990 CXCL16Q9H2A7 254 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 GDAP2Q9NXN4 497 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.33■□□□□ 0.36
CACNB3-203ENST00000540990 ARMCX1Q9P291 453 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 DNAJB4Q9UDY4 337 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 TUBGCP4Q9UGJ1 667 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 EMCNQ9ULC0 261 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 FZD10Q9ULW2 581 aa17.33■□□□□ 0.36
CACNB3-203ENST00000540990 SCN1AP35498 2009 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 B2RBV5 119 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 H3BRB1 525 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 PIRO00625 290 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 TM7SF2O76062 418 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 PGAM1P18669 254 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 ATXN1P54253 815 aaKnown RBP17.32■□□□□ 0.36
CACNB3-203ENST00000540990 AQP5P55064 265 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 CDC42EP1Q00587 391 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 TUBB3Q13509 450 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 EFHC1Q5JVL4 640 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 FAM182AQ5T1J6 154 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 PACS1Q6VY07 963 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 CLEC4CQ8WTT0 213 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 NRG4Q8WWG1 115 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 NT5C3BQ969T7 300 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 ISL2Q96A47 359 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 DPEP3Q9H4B8 488 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 TUT1Q9H6E5 874 aaKnown RBP17.32■□□□□ 0.36
CACNB3-203ENST00000540990 SNTG2Q9NY99 539 aa17.32■□□□□ 0.36
CACNB3-203ENST00000540990 PPARGC1AQ9UBK2 798 aaKnown RBP17.32■□□□□ 0.36
CACNB3-203ENST00000540990 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 TBX10O75333 385 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 ALDOAP04075 364 aaKnown RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 ZNF286BP0CG31 522 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 FGF3P11487 239 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 AMPD1P23109 780 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 MATKP42679 507 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 AP1B1Q10567 949 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 FRG1Q14331 258 aaKnown RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 TRMT5Q32P41 509 aaKnown RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 TEDDM1Q5T9Z0 273 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 CAPRIN2Q6IMN6 1127 aaKnown RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 IRGCQ6NXR0 463 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 LRRC74BQ6ZQY2 392 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 C7orf31Q8N865 590 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 RBM15BQ8NDT2 890 aaKnown RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 OR6B3Q8NGW1 331 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 LRRN4Q8WUT4 740 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 CDKL2Q92772 493 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 OSBPL1AQ9BXW6 950 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 FAM96AQ9H5X1 160 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 ZNF395Q9H8N7 513 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 DCDC2Q9UHG0 476 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 UBQLN1Q9UMX0 589 aaKnown RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 LRCH1Q9Y2L9 728 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 CAPN9O14815 690 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 PLIN3O60664 434 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 ALOX15P16050 662 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-203ENST00000540990 PAX7P23759 505 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 ARL4AP40617 200 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 CCDC6Q16204 474 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 SLC25A52Q3SY17 297 aa17.31■□□□□ 0.36
CACNB3-203ENST00000540990 FASTKD1Q53R41 847 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms