RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 MUTP22033 750 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 RPA1P27694 616 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 EIF2S3P41091 472 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 GRIA2P42262 883 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 NPTX2P47972 431 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 PDE6CP51160 858 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 LILRA4P59901 499 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 RAD51AP2Q09MP3 1159 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 GRIK2Q13002 908 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 NOLC1Q14978 699 aaKnown RBP eCLIP4.94□□□□□ -1.621e-323■■■■■ 35.2
SNHG1-214ENST00000540865 KYAT1Q16773 422 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 GAB4Q2WGN9 574 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 EARS2Q5JPH6 523 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 ZBTB37Q5TC79 503 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SCARA3Q6AZY7 606 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 PCSK4Q6UW60 755 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 HDXQ7Z353 690 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 METTL23Q86XA0 190 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SLC41A1Q8IVJ1 513 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SMYD4Q8IYR2 804 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 DCP1BQ8IZD4 617 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 THEM5Q8N1Q8 247 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 DEFB119Q8N690 84 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 RNF214Q8ND24 703 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 ERMNQ8TAM6 284 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SH3RF2Q8TEC5 729 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SETD7Q8WTS6 366 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 GATAD2BQ8WXI9 593 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 NXPE2Q96DL1 559 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 TRMT2BQ96GJ1 504 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 HSPA12BQ96MM6 686 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 YTHDC1Q96MU7 727 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 FCRL3Q96P31 734 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 CYP2S1Q96SQ9 504 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 PNKPQ96T60 521 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SPON2Q9BUD6 331 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 TARS2Q9BW92 718 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 FBRSQ9HAH7 460 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SSU72Q9NP77 194 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 PCMTD2Q9NV79 361 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 GCNT4Q9P109 453 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 ARHGAP28Q9P2N2 729 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 ARHGAP26Q9UNA1 814 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 NFE2L3Q9Y4A8 694 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 CORINQ9Y5Q5 1042 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 KNTC1P50748 2209 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 BSNQ9UPA5 3926 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 STK36Q9NRP7 1315 aa4.94□□□□□ -1.62
SNHG1-214ENST00000540865 SPTAN1Q13813 2472 aaKnown RBP4.94□□□□□ -1.62
SNHG1-214ENST00000540865 EML5Q05BV3 1969 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 COL6A6A6NMZ7 2263 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 A0A1B0GTW7 788 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 PIRO00625 290 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SLC9A3R1O14745 358 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 PPEF2O14830 753 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 CLDN3O15551 220 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 TNFSF14O43557 240 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 TLX3O43711 291 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 GREM1O60565 184 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 NDUFS2O75306 463 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 TADA3O75528 432 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 CDKL5O76039 1030 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 UBR5O95071 2799 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 CER1O95813 267 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 NTRK1P04629 796 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 CYP17A1P05093 508 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ADRB2P07550 413 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 CXCL8P10145 99 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 PFKLP17858 780 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 HDCP19113 662 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 PSMA5P28066 241 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ADMP35318 185 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 MATKP42679 507 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SLC6A11P48066 632 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 PEX3P56589 373 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 RPL10AP62906 217 aaKnown RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SPAG1Q07617 926 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 MCL1Q07820 350 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SRSF1Q07955 248 aaKnown RBP eCLIP4.93□□□□□ -1.625e-12■■□□□ 12.5
SNHG1-214ENST00000540865 CDK5R2Q13319 367 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 KCNB1Q14721 858 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 DHCR24Q15392 516 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 NFE2Q16621 373 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 PREPLQ4J6C6 727 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SEZ6Q53EL9 994 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 EMC10Q5UCC4 262 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 SPATA1Q5VX52 437 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 DIEXFQ68CQ4 756 aaKnown RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 IL27RAQ6UWB1 636 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ZPBP2Q6X784 338 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 LRRTM3Q86VH5 581 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 TMPRSS12Q86WS5 348 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 MARCH9Q86YJ5 346 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ADGRG2Q8IZP9 1017 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ARL14EPQ8N8R7 260 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-214ENST00000540865 FSIP1Q8NA03 581 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 ENGASEQ8NFI3 743 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 LRRC15Q8TF66 581 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 DNASE2BQ8WZ79 361 aa4.93□□□□□ -1.62
SNHG1-214ENST00000540865 NUP205Q92621 2012 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms