RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 HOXD9P28356 352 aaPredicted RBP11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 NTSR1P30989 418 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 SLC11A2P49281 568 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 KLK7P49862 253 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 JAM2P57087 298 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 SRSF5Q13243 272 aaKnown RBP11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 PTPN20Q4JDL3 420 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 ANO6Q4KMQ2 910 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 FAM133BQ5BKY9 247 aaKnown RBP11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 OLFML1Q6UWY5 402 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 PRR23BQ6ZRT6 265 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 TAC4Q86UU9 113 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 ZDHHC17Q8IUH5 632 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 PASD1Q8IV76 773 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 DCLK2Q8N568 766 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 GPR161Q8N6U8 529 aaKnown RBP11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 TMEM35BQ8NCS4 154 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 C1orf131Q8NDD1 294 aaKnown RBP11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 EPS8L1Q8TE68 723 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 DDI1Q8WTU0 396 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 BHMTQ93088 406 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 ZC3H10Q96K80 434 aaKnown RBP11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 SLC2A13Q96QE2 648 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 ERGIC2Q96RQ1 377 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 GABRG3Q99928 467 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 POLMQ9NP87 494 aaPredicted RBP11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 NCDNQ9UBB6 729 aa11.25□□□□□ -0.61
SLC3A2-215ENST00000539891 NPC1O15118 1278 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 EPHB6O15197 1021 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 LRP3O75074 770 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 ALDH1A2O94788 518 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 LSM8O95777 96 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 TRUB2O95900 331 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 ERBB2P04626 1255 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 RETP07949 1114 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 CDK11BP21127 795 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 SCNN1AP37088 669 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 GABRB2P47870 512 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 POLR2FP61218 127 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 SLC6A3Q01959 620 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 ENPP2Q13822 863 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 EIF4HQ15056 248 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 E2F5Q15329 346 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 SYCP1Q15431 976 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 TAF5Q15542 800 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 GEN1Q17RS7 908 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 PIK3R6Q5UE93 754 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 EGFLAMQ63HQ2 1017 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 FAM183BPQ6ZVS7 135 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 CEP68Q76N32 757 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 SLC26A9Q7LBE3 791 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 CACNA2D4Q7Z3S7 1137 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 KIAA0907Q7Z7F0 614 aaPredicted RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 NOP9Q86U38 636 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 ZNF677Q86XU0 584 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 AOPEPQ8N6M6 819 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 MDGA1Q8NFP4 955 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 OLIG1Q8TAK6 271 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 IPO4Q8TEX9 1081 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 TMA16Q96EY4 203 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 LOXL4Q96JB6 756 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 DDX50Q9BQ39 737 aaKnown RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 FUCA2Q9BTY2 467 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 CD248Q9HCU0 757 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 ZDHHC4Q9NPG8 344 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 FAM207AQ9NSI2 230 aaPredicted RBP11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 GMEB2Q9UKD1 530 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 CLEC4EQ9ULY5 219 aa11.24□□□□□ -0.61
SLC3A2-215ENST00000539891 TNRC6BQ9UPQ9 1833 aaKnown RBP11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 MUC22E2RYF6 1773 aaPredicted RBP11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 A0A1W2PQF6 199 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 SMTNL1A8MU46 457 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 TIMM44O43615 452 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 TSPAN3O60637 253 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 ATP1A3P13637 1013 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 HOXB2P14652 356 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 PTMSP20962 102 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 TGM1P22735 817 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 SLC6A4P31645 630 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 SOX5P35711 763 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 PI4KAP42356 2102 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 CDK17Q00537 523 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 UBXN1Q04323 297 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 LPAL2Q16609 132 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 USP39Q53GS9 565 aaKnown RBP11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 DCAF6Q58WW2 860 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 NADSYN1Q6IA69 706 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 OR6B2Q6IFH4 312 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 ANO7Q6IWH7 933 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 ANKS1BQ7Z6G8 1248 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 C11orf74Q86VG3 221 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 CHPFQ8IZ52 775 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 DEFB106AQ8N104 65 aa11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.23□□□□□ -0.61
SLC3A2-215ENST00000539891 ZNF557Q8N988 423 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms