RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TMA16Q96EY4 203 aaKnown RBP15.97■□□□□ 0.15
UBE3B-211ENST00000539843 ZNF419Q96HQ0 510 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-211ENST00000539843 TRIM62Q9BVG3 475 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 IRX2Q9BZI1 471 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-211ENST00000539843 ZDHHC5Q9C0B5 715 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 NFE2L3Q9Y4A8 694 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 UPK3BL1B0FP48 263 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 WASH3PC4AMC7 463 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 UPK3BL2E5RIL1 263 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 H0Y626 953 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 M0QYV0 167 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 PMM2O15305 246 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 SART1O43290 800 aaKnown RBP15.96■□□□□ 0.15
UBE3B-211ENST00000539843 FBXO21O94952 628 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 TRIM16O95361 564 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
UBE3B-211ENST00000539843 ATP5BP06576 529 aaKnown RBP15.96■□□□□ 0.15
UBE3B-211ENST00000539843 NCAM1P13591 858 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 ZNF234Q14588 700 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 FNDC3BQ53EP0 1204 aaKnown RBP15.96■□□□□ 0.15
UBE3B-211ENST00000539843 ADGRF1Q5T601 910 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 KLHL10Q6JEL2 608 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 LCLAT1Q6UWP7 414 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 FAM217AQ8IXS0 508 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 ELOA2Q8IYF1 753 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-211ENST00000539843 AHI1Q8N157 1196 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 MINDY1Q8N5J2 469 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 CADM4Q8NFZ8 388 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 SPATA20Q8TB22 786 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 TOE1Q96GM8 510 aaKnown RBP15.96■□□□□ 0.15
UBE3B-211ENST00000539843 PIWIL1Q96J94 861 aaKnown RBP15.96■□□□□ 0.15
UBE3B-211ENST00000539843 FBRSQ9HAH7 460 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 CAPN10Q9HC96 672 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 PCDHB9Q9Y5E1 797 aa15.96■□□□□ 0.15
UBE3B-211ENST00000539843 A0A1B0GTW7 788 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 YJEFN3A6XGL0 299 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 E7ENQ6 273 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 IRAK2O43187 625 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
UBE3B-211ENST00000539843 DAOAP59103 153 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 SIM1P81133 766 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-211ENST00000539843 SLC14A1Q13336 389 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 CNGA2Q16280 664 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 IL27RAQ6UWB1 636 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 SLC41A1Q8IVJ1 513 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 ENGASEQ8NFI3 743 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 HSFY1Q96LI6 401 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 NUP58Q9BVL2 599 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 GPR174Q9BXC1 333 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 MIR1-1HGQ9H1L0 117 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 SLC6A17Q9H1V8 727 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 CD248Q9HCU0 757 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 ITM2CQ9NQX7 267 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 USP36Q9P275 1121 aaKnown RBP15.95■□□□□ 0.14
UBE3B-211ENST00000539843 SFMBT1Q9UHJ3 866 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 PLXND1Q9Y4D7 1925 aa15.95■□□□□ 0.14
UBE3B-211ENST00000539843 TMEM8BA6NDV4 472 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 TULP2O00295 520 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 TSPAN3O60637 253 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 KRT37O76014 449 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 PROS1P07225 676 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 HOXD9P28356 352 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 SFSWAPQ12872 951 aaKnown RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 SEMA3BQ13214 749 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 ENPP2Q13822 863 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 TTC31Q49AM3 519 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 FOXR2Q6PJQ5 311 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 UNQ6494/PRO21346Q6UXR6 183 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 CHST9Q7L1S5 443 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 RBBP8NLQ8NC74 664 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 OR2T3Q8NH03 318 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 NELFBQ8WX92 580 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 NDRG1Q92597 394 aaKnown RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 ERCC4Q92889 916 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 SERPINB11Q96P15 392 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 ADAM33Q9BZ11 813 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 MKRN2Q9H000 416 aaKnown RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 PCED1AQ9H1Q7 454 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 LHX5Q9H2C1 402 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 WSB2Q9NYS7 404 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 GGA2Q9UJY4 613 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 STOML2Q9UJZ1 356 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
UBE3B-211ENST00000539843 MYO18AQ92614 2054 aaKnown RBP15.94■□□□□ 0.14
UBE3B-211ENST00000539843 MED7O43513 233 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 LTFP02788 710 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 PABPC1P11940 636 aaKnown RBP15.93■□□□□ 0.14
UBE3B-211ENST00000539843 POLR2EP19388 210 aaKnown RBP15.93■□□□□ 0.14
UBE3B-211ENST00000539843 ACADSBP45954 432 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 RGS7P49802 495 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 TPMTP51580 245 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 TBX4P57082 545 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 ST8SIA6P61647 398 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 GCNT1Q02742 428 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 RING1Q06587 406 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 MPP7Q5T2T1 576 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 ISM2Q6H9L7 571 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 MSANTD2Q6P1R3 559 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 CACUL1Q86Y37 369 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms