RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 FAM47CQ5HY64 1035 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 WDR75Q8IWA0 830 aaKnown RBP20.94■□□□□ 0.94
TMEM260-203ENST00000539559 PHTF2Q8N3S3 785 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 GDPD5Q8WTR4 605 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 TMEM176AQ96HP8 235 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 EBNA1BP2Q99848 306 aaKnown RBP20.94■□□□□ 0.94
TMEM260-203ENST00000539559 UBE2OQ9C0C9 1292 aaKnown RBP20.94■□□□□ 0.94
TMEM260-203ENST00000539559 PCDH18Q9HCL0 1135 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 GPAMQ9HCL2 828 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 PSAT1Q9Y617 370 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 RLFQ13129 1914 aa20.94■□□□□ 0.94
TMEM260-203ENST00000539559 FAM159BA6NKW6 160 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 SLC10A2Q12908 348 aaPredicted RBP20.93■□□□□ 0.94
TMEM260-203ENST00000539559 STXBP2Q15833 593 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 CCDC14Q49A88 953 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 ARMC3Q5W041 872 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 KYAT3Q6YP21 454 aaKnown RBP20.93■□□□□ 0.94
TMEM260-203ENST00000539559 C10orf107Q8IVU9 208 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 DEFB107AQ8IZN7 70 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 SNRNP25Q9BV90 132 aaKnown RBP20.93■□□□□ 0.94
TMEM260-203ENST00000539559 CEP41Q9BYV8 373 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 ACAD9Q9H845 621 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 SPDYE16A6NNV3 312 aaPredicted RBP20.93■□□□□ 0.94
TMEM260-203ENST00000539559 ALDOAP04075 364 aaKnown RBP20.93■□□□□ 0.94
TMEM260-203ENST00000539559 TRIP10Q15642 601 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 CES3Q6UWW8 571 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 DLK2Q6UY11 383 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 MOCOSQ96EN8 888 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 RNPEPQ9H4A4 650 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 APOBEC2Q9Y235 224 aaKnown RBP20.93■□□□□ 0.94
TMEM260-203ENST00000539559 CSADQ9Y600 493 aa20.93■□□□□ 0.94
TMEM260-203ENST00000539559 TCF7P36402 384 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-203ENST00000539559 COPAP53621 1224 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 PDE1CQ14123 709 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-203ENST00000539559 SATL1Q86VE3 508 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 ATXN7L3BQ96GX2 97 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 BCO2Q9BYV7 579 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 MINDY3Q9H8M7 445 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 POLR2AP24928 1970 aaKnown RBP20.92■□□□□ 0.94
TMEM260-203ENST00000539559 FKBP6O75344 327 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 PGM3O95394 542 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 RAG1P15918 1043 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 IDH3AP50213 366 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 ATF7IP2Q5U623 682 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 MARK2Q7KZI7 788 aaKnown RBP20.92■□□□□ 0.94
TMEM260-203ENST00000539559 C1orf21Q9H246 121 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 NRBP2Q9NSY0 501 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 TRIP11Q15643 1979 aa20.92■□□□□ 0.94
TMEM260-203ENST00000539559 ADM5C9JUS6 153 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 CILPO75339 1184 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 MAFO75444 373 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-203ENST00000539559 FARP2O94887 1054 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-203ENST00000539559 SESN2P58004 480 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-203ENST00000539559 USP4Q13107 963 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 MED21Q13503 144 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 LY6KQ17RY6 165 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 FBXL19Q6PCT2 694 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 FRMD7Q6ZUT3 714 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 PPP1R36Q96LQ0 422 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 B3GNT5Q9BYG0 378 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 MAF1Q9H063 256 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 CDH22Q9UJ99 828 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 GRM1Q13255 1194 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 PCLAFQ15004 111 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 GRAMD1BQ3KR37 738 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 JADE1Q6IE81 842 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 ACAD11Q709F0 780 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 SCUBE3Q8IX30 993 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 CLMNQ96JQ2 1002 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 SYT17Q9BSW7 474 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 PCDHGB4Q9UN71 923 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 PCDHGB5Q9Y5G0 923 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 LACTBL1A8MY62 500 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 DCXO43602 365 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 IQCF3P0C7M6 154 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 VCLP18206 1134 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 MSX2P35548 267 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-203ENST00000539559 MPZL3Q6UWV2 235 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 ST13P4Q8IZP2 240 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-203ENST00000539559 TFB1MQ8WVM0 346 aaKnown RBP20.91■□□□□ 0.94
TMEM260-203ENST00000539559 GCNAQ96QF7 691 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 SORT1Q99523 831 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 NDNQ99608 321 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 MIS12Q9H081 205 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 TSPAN16Q9UKR8 245 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 POMPQ9Y244 141 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 PCDHA11Q9Y5I1 949 aa20.91■□□□□ 0.94
TMEM260-203ENST00000539559 BIRC5O15392 142 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 GABRB2P47870 512 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 GTF2A2P52657 109 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 EFNA5P52803 228 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 NDST1P52848 882 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 MMEL1Q495T6 779 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 PDPK2PQ6A1A2 396 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 ZBTB8OSQ8IWT0 167 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 NMD3Q96D46 503 aaKnown RBP20.9■□□□□ 0.94
TMEM260-203ENST00000539559 PGBD4Q96DM1 585 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 LPIN3Q9BQK8 851 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 CENPKQ9BS16 269 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 KLHL4Q9C0H6 718 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms