RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS37C-204ENST00000538036 BTBD3Q9Y2F9 522 aa10.72□□□□□ -0.69
VPS37C-204ENST00000538036 PCDHGA1Q9Y5H4 931 aa10.72□□□□□ -0.69
VPS37C-204ENST00000538036 SNX11Q9Y5W9 270 aa10.72□□□□□ -0.69
VPS37C-204ENST00000538036 KNTC1P50748 2209 aa10.72□□□□□ -0.69
VPS37C-204ENST00000538036 GOLGA8CPA6NN73 597 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 TSPAN3O60637 253 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 CUTAO60888 179 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 SEMA4FO95754 770 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 C1SP09871 688 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 PRKCHP24723 683 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 ABCG1P45844 678 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 EFEMP1Q12805 493 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 GOLGA4Q13439 2230 aaKnown RBP10.71□□□□□ -0.69
VPS37C-204ENST00000538036 MPPE1Q53F39 396 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 FAM124AQ86V42 546 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 DENND1CQ8IV53 801 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 FAM217AQ8IXS0 508 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 TTC39CQ8N584 583 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 WFIKKN2Q8TEU8 576 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 SNX19Q92543 992 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 GOLGA1Q92805 767 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 COL26A1Q96A83 441 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 JAKMIP2Q96AA8 810 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 SKA1Q96BD8 255 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 PLD4Q96BZ4 506 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 TMEM245Q9H330 911 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 C6orf106Q9H6K1 298 aaPredicted RBP10.71□□□□□ -0.69
VPS37C-204ENST00000538036 SGK2Q9HBY8 427 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 TM9SF3Q9HD45 589 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 ASH1LQ9NR48 2969 aaKnown RBP10.71□□□□□ -0.69
VPS37C-204ENST00000538036 MARCH2Q9P0N8 246 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 RASAL2Q9UJF2 1139 aa10.71□□□□□ -0.69
VPS37C-204ENST00000538036 PTPRBP23467 1997 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 PDXKO00764 312 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 VILLO15195 856 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 ACSL1P33121 698 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 HNF1BP35680 557 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 PIK3CAP42336 1068 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 CTSKP43235 329 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 BCAT1P54687 386 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 DLG4P78352 724 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 SFSWAPQ12872 951 aaKnown RBP10.7□□□□□ -0.7
VPS37C-204ENST00000538036 GSE1Q14687 1217 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 TTC31Q49AM3 519 aaPredicted RBP10.7□□□□□ -0.7
VPS37C-204ENST00000538036 TMEM215Q68D42 235 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 RSRC2Q7L4I2 434 aaKnown RBP10.7□□□□□ -0.7
VPS37C-204ENST00000538036 SORCS1Q8WY21 1168 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 BIRC7Q96CA5 298 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 NXPE2Q96DL1 559 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 INTS4Q96HW7 963 aaKnown RBP10.7□□□□□ -0.7
VPS37C-204ENST00000538036 FAXDC2Q96IV6 333 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 ZNF396Q96N95 335 aaPredicted RBP10.7□□□□□ -0.7
VPS37C-204ENST00000538036 TWNKQ96RR1 684 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
VPS37C-204ENST00000538036 FTSJ1Q9UET6 329 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 SUN2Q9UH99 717 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 SCML1Q9UN30 329 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 MTMR6Q9Y217 621 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 FRMD4BQ9Y2L6 1034 aa10.7□□□□□ -0.7
VPS37C-204ENST00000538036 SMG1Q96Q15 3661 aaKnown RBP10.7□□□□□ -0.7
VPS37C-204ENST00000538036 FAM149AA5PLN7 773 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 H0Y8X5 98 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 MAPK13O15264 365 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ATXN7O15265 892 aaPredicted RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 POLR2DO15514 142 aaKnown RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 KIF20AO95235 890 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 YEATS4O95619 227 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 HLA-DRAP01903 254 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 DNTTP04053 509 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ATP5BP06576 529 aaKnown RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 HMBSP08397 361 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 SLFN14P0C7P3 912 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 JUPP14923 745 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 HARS2P49590 506 aaKnown RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 C21orf59P57076 290 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 SLC8A3P57103 927 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 RACK1P63244 317 aaKnown RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ENPEPQ07075 957 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 TRIP4Q15650 581 aaPredicted RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 FNDC3BQ53EP0 1204 aaKnown RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 C6orf118Q5T5N4 469 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 SPOPLQ6IQ16 392 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 SHC4Q6S5L8 630 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 DHRS13Q6UX07 377 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 LRRC69Q6ZNQ3 347 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 USP30Q70CQ3 517 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ADAT2Q7Z6V5 191 aaKnown RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ZNF557Q8N988 423 aaPredicted RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 CCDC150Q8NCX0 1101 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ADAM32Q8TC27 787 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ELMO3Q96BJ8 720 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 ACE2Q9BYF1 805 aaPredicted RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 NIF3L1Q9GZT8 377 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 BLZF1Q9H2G9 400 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 OLA1Q9NTK5 396 aaKnown RBP10.69□□□□□ -0.7
VPS37C-204ENST00000538036 STOML2Q9UJZ1 356 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 CLEC4EQ9ULY5 219 aa10.69□□□□□ -0.7
VPS37C-204ENST00000538036 NCKAP1Q9Y2A7 1128 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms