RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ADAMTSL2Q86TH1 951 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 LURAP1LQ8IV03 231 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NUDCD3Q8IVD9 361 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM47BQ8NA70 645 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 RAB2BQ8WUD1 216 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 GPKOWQ92917 476 aaPredicted RBP eCLIP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 RTKNQ9BST9 563 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 RAD21L1Q9H4I0 556 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 POLR1BQ9H9Y6 1135 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 MAGEE1Q9HCI5 957 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ACP6Q9NPH0 428 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 PSME2Q9UL46 239 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 A0A1B0GUL6 1792 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 LRRIQ4A6NIV6 560 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 F5H6K3 240 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 NOP56O00567 594 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SNPHO15079 494 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ZW10O43264 779 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 KLRC2P26717 231 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 NME3Q13232 169 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 TFDP1Q14186 410 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SELPLGQ14242 412 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 PPP2R5DQ14738 602 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 CCDC142Q17RM4 750 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 METTL24Q5JXM2 366 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 C16orf89Q6UX73 402 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ARMC8Q8IUR7 673 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 TMEM102Q8N9M5 508 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SIMC1Q8NDZ2 872 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 NGDNQ8NEJ9 315 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 PDCD6IPQ8WUM4 868 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC35C1Q96A29 364 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 VPS33AQ96AX1 596 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 NRBF2Q96F24 287 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 NYXQ9GZU5 481 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SP140LQ9H930 580 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 BCORQ6W2J9 1755 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 LINC00854A0A1B0GVQ3 168 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 GAS7O60861 476 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 KCNJ13O60928 360 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ZC3H11AO75152 810 aaKnown RBP eCLIP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SEC24DO94855 1032 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 OPRL1P41146 370 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 DNASE1L3Q13609 305 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SNX17Q15036 470 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 CHI3L2Q15782 390 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 IQSEC1Q6DN90 963 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ZCCHC8Q6NZY4 707 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 LINC00469Q8N7U9 141 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SNX31Q8N9S9 440 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC29A1Q99808 456 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 EBF4Q9BQW3 602 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF717Q9BY31 904 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 COQ10BQ9H8M1 238 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 VRTNQ9H8Y1 702 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 GPN2Q9H9Y4 310 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 NXF1Q9UBU9 619 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 VANGL2Q9ULK5 521 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 CAB39Q9Y376 341 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 LOC100653049A0A140TA62 436 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 KRT34O76011 436 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 RFX1P22670 979 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 EPHA3P29320 983 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 GJA9P57773 515 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ANO4Q32M45 955 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 AASDHQ4L235 1098 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 RSBN1Q5VWQ0 802 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 FRMD7Q6ZUT3 714 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 GPBP1Q86WP2 473 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 HERC6Q8IVU3 1022 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 TPH2Q8IWU9 490 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 CTAGE3PQ8IX95 158 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ABHD11Q8NFV4 315 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 PIWIL2Q8TC59 973 aaKnown RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 DCAKDQ8WVC6 231 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 TP53INP1Q96A56 240 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SCUBE2Q9NQ36 999 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 NDFIP2Q9NV92 336 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 ABI2Q9NYB9 513 aaPredicted RBP8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SIRPGQ9P1W8 387 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 SHOC2Q9UQ13 582 aa8.76□□□□□ -1.01
SRGAP1-202ENST00000537556 PSME4Q14997 1843 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 TRIM64A6NGJ6 449 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM25AB3EWG3 89 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM25CB3EWG5 89 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM25GB3EWG6 89 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PDXKO00764 312 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 ENPP3O14638 875 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 RFPL2O75678 378 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 SNRPA1P09661 255 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 GZMAP12544 262 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 CFL1P23528 166 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 GRIK1P39086 918 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 HADHAP40939 763 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 MAP3K7CLP57077 242 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms