RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SHC3Q92529 594 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 ACOX2Q99424 681 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 GTPBP2Q9BX10 602 aaKnown RBP13.02□□□□□ -0.33
PRKDC-207ENST00000536483 ULBP1Q9BZM6 244 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 UBE2TQ9NPD8 197 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-207ENST00000536483 DNAJC17Q9NVM6 304 aaKnown RBP13.02□□□□□ -0.33
PRKDC-207ENST00000536483 APEX2Q9UBZ4 518 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 FBXO10Q9UK96 956 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 SLC6A14Q9UN76 642 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 FAM208BQ5VWN6 2430 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.33
PRKDC-207ENST00000536483 IGHV1OR15-9A0A0B4J2B8 117 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 PRRT4C9JH25 899 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 NEDD8-MDP1E9PL57 170 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 HYAL3O43820 417 aaPredicted RBP13.01□□□□□ -0.33
PRKDC-207ENST00000536483 STC2O76061 302 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 KLKB1P03952 638 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 TYRP14679 529 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 SLC9A1P19634 815 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 PTMSP20962 102 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 EEF1GP26641 437 aaKnown RBP13.01□□□□□ -0.33
PRKDC-207ENST00000536483 HOXD12P35452 270 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 DAOAP59103 153 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 ZNF33AQ06730 810 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 SEMA3BQ13214 749 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 C10orf120Q5SQS8 335 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 SDE2Q6IQ49 451 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 PIP4P1Q86T03 277 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 FAM217AQ8IXS0 508 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 HDDC3Q8N4P3 179 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 CEP76Q8TAP6 659 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 IPO4Q8TEX9 1081 aaKnown RBP13.01□□□□□ -0.33
PRKDC-207ENST00000536483 GATA6Q92908 595 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 XPO6Q96QU8 1125 aaKnown RBP13.01□□□□□ -0.33
PRKDC-207ENST00000536483 BBS2Q9BXC9 721 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 DCLK3Q9C098 648 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 NDST4Q9H3R1 872 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
PRKDC-207ENST00000536483 WDR35Q9P2L0 1181 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 STOML2Q9UJZ1 356 aa13.01□□□□□ -0.33
PRKDC-207ENST00000536483 LSM7Q9UK45 103 aaKnown RBP13.01□□□□□ -0.33
PRKDC-207ENST00000536483 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 YJEFN3A6XGL0 299 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 BECN2A8MW95 431 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 E7ENQ6 273 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 GFRA2O00451 464 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 ZBTB24O43167 697 aaPredicted RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 CACNG3O60359 315 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 ZNF217O75362 1048 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 FBXO21O94952 628 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 MBD3O95983 291 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 SERPINF2P08697 491 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 NDUFV2P19404 249 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 BRD2P25440 801 aaKnown RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 MTIF2P46199 727 aaKnown RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 SIM1P81133 766 aaPredicted RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 GFPT1Q06210 699 aaPredicted RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 ADIGQ0VDE8 80 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 TRIP4Q15650 581 aaPredicted RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 VWA3BQ502W6 1294 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 CDKAL1Q5VV42 579 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 BSPRYQ5W0U4 402 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 TMEM110Q86TL2 294 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 SLC41A1Q8IVJ1 513 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 CPXM2Q8N436 756 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 OR2I1PQ8NGU4 316 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 ZNF606Q8WXB4 792 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 TUBGCP2Q9BSJ2 902 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 CRACR2AQ9BSW2 395 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 SLC6A17Q9H1V8 727 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 CAPN10Q9HC96 672 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 CD248Q9HCU0 757 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 CD93Q9NPY3 652 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 MARCH2Q9P0N8 246 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 NUDT5Q9UKK9 219 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 CYP8B1Q9UNU6 501 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
PRKDC-207ENST00000536483 RAD54BQ9Y620 910 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 AKAP13Q12802 2813 aa13□□□□□ -0.33
PRKDC-207ENST00000536483 TMEM8BA6NDV4 472 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 LRRC10BA6NIK2 292 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 UPK3BL1B0FP48 263 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 UPK3BL2E5RIL1 263 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 MDM4O15151 490 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 MED7O43513 233 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 OPHN1O60890 802 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 LATS1O95835 1130 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 PENKP01210 267 aaPredicted RBP12.99□□□□□ -0.33
PRKDC-207ENST00000536483 CHKAP35790 457 aa12.99□□□□□ -0.33
PRKDC-207ENST00000536483 ACADSBP45954 432 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms