RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 LPAR1Q92633 364 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 DPH1Q9BZG8 443 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 TMX1Q9H3N1 280 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 SUDS3Q9H7L9 328 aaPredicted RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 HIF1ANQ9NWT6 349 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 NUDCQ9Y266 331 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 STXBP5LQ9Y2K9 1186 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 PRKAB1Q9Y478 270 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 PAXBP1Q9Y5B6 917 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 PCDHGB1Q9Y5G3 927 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 CUX2O14529 1486 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 KIR2DS5A0A0G2JLQ3 304 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 RPS10-NUDT3A0A1W2PQS6 291 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 CCDC189A1A4V9 331 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 KIR2DS3K7RE56 304 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 AGPSO00116 658 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 ALDH2P05091 517 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 TPM3P06753 285 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 UMODP07911 640 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 HGFP14210 728 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 TFEBP19484 476 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 IDUAP35475 653 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 RECQLP46063 649 aaPredicted RBP2.86□□□□□ -1.95
SKA3-207ENST00000536239 RFX2P48378 723 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 PGDP52209 483 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 ERVFC1-1P60608 527 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 CCDC15Q0P6D6 951 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 MYBPC2Q14324 1141 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 SF3B4Q15427 424 aaKnown RBP eCLIP2.86□□□□□ -1.95
SKA3-207ENST00000536239 ST3GAL2Q16842 350 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 SMTNL2Q2TAL5 461 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 WASHC2DQ5SRD0 308 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 CACHD1Q5VU97 1274 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 PRSS57Q6UWY2 283 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 KCTD20Q7Z5Y7 419 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 FAM177A1Q8N128 213 aaPredicted RBP2.86□□□□□ -1.95
SKA3-207ENST00000536239 SDR16C5Q8N3Y7 309 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 METTL25Q8N6Q8 603 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 OR6B3Q8NGW1 331 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 TBC1D22AQ8WUA7 517 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 VPS50Q96JG6 964 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 CGRRF1Q99675 332 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 SEZ6LQ9BYH1 1024 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 TM6SF1Q9BZW5 370 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 CDCP1Q9H5V8 836 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 CXorf56Q9H5V9 222 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 STK26Q9P289 416 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 STAP2Q9UGK3 403 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 RSPH14Q9UHP6 348 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 KCNG2Q9UJ96 466 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 MYO6Q9UM54 1294 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 SUFUQ9UMX1 484 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 INSL5Q9Y5Q6 135 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 HEMK1Q9Y5R4 338 aaPredicted RBP2.86□□□□□ -1.95
SKA3-207ENST00000536239 MORC2Q9Y6X9 1032 aaPredicted RBP2.86□□□□□ -1.95
SKA3-207ENST00000536239 TNIKQ9UKE5 1360 aa2.86□□□□□ -1.95
SKA3-207ENST00000536239 A0A088AWK7 358 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 H0YHG0 523 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 IPO8O15397 1037 aaKnown RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 TBC1D4O60343 1298 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 KATNA1O75449 491 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 EIF3JO75822 258 aaKnown RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 REC8O95072 547 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 MBPP02686 304 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 SETSIPP0DME0 302 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 CHRNB1P11230 501 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 NPR1P16066 1061 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 CASQ1P31415 396 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 GALNSP34059 522 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 ART1P52961 327 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 WDR5P61964 334 aaKnown RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 RAB1AP62820 205 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 SARNPP82979 210 aaKnown RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 CHAF1AQ13111 956 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 SLC13A2Q13183 592 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 RAB32Q13637 225 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 DLGAP5Q15398 846 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 ZRSR2Q15696 482 aaKnown RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 PIK3CD-AS1Q5SR53 167 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 PRAMEF19Q5SWL8 479 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 GIMAP6Q6P9H5 292 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 SUGP1Q8IWZ8 645 aaKnown RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 UEVLDQ8IX04 471 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 ANKRD7Q92527 254 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 SIN3AQ96ST3 1273 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 CINPQ9BW66 212 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 GATA5Q9BWX5 397 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 TEX13AQ9BXU3 409 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 SMURF2Q9HAU4 748 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 DIAPH3Q9NSV4 1193 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 STEAP1Q9UHE8 339 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 RIMKLBQ9ULI2 386 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 SMC3Q9UQE7 1217 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 ZNF335Q9H4Z2 1342 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 RSF1Q96T23 1441 aaPredicted RBP2.85□□□□□ -1.95
SKA3-207ENST00000536239 KIAA1107Q9UPP5 1409 aa2.85□□□□□ -1.95
SKA3-207ENST00000536239 WDR97A6NE52 1622 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 A0A0B4J293 547 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 A0A1B0GUL7 405 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms