RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 WNT16Q9UBV4 365 aa5.65□□□□□ -1.5
ATM-224ENST00000534625 FBXW11Q9UKB1 542 aa5.65□□□□□ -1.5
ATM-224ENST00000534625 CNOT11Q9UKZ1 510 aaKnown RBP5.65□□□□□ -1.5
ATM-224ENST00000534625 DNM3Q9UQ16 869 aa5.65□□□□□ -1.5
ATM-224ENST00000534625 TNFSF13BQ9Y275 285 aa5.65□□□□□ -1.5
ATM-224ENST00000534625 MYH11P35749 1972 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 SPTBN2O15020 2390 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 SMIM28A0A1B0GU29 152 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 CCDC169A6NNP5 214 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 PROB1E7EW31 1015 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 LAD1O00515 517 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 CCL16O15467 120 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 KLF4O43474 513 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 DLX3O60479 287 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 B3GAT3O94766 335 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 LRG1P02750 347 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 ITGB3P05106 788 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 HNRNPA1P09651 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
ATM-224ENST00000534625 AOC1P19801 751 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 PROZP22891 400 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 TKTP29401 623 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 HOXA9P31269 272 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 OR1D2P34982 312 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 NBL1P41271 181 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 CLCNKBP51801 687 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 PEX3P56589 373 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 OSTNP61366 133 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 ELAVL2Q12926 359 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 DMP1Q13316 513 aaPredicted RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 HTR4Q13639 388 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 RAB33AQ14088 237 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 UPP1Q16831 310 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 GLRA4Q5JXX5 417 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 HYIQ5T013 277 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 KRT79Q5XKE5 535 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 STEAP3Q658P3 488 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 PDXDC1Q6P996 788 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 GET4Q7L5D6 327 aaPredicted RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 GRASPQ7Z6J2 395 aaPredicted RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 TXNDC5Q8NBS9 432 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 ST13P5Q8NFI4 369 aaPredicted RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 ITFG1Q8TB96 612 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 TMX3Q96JJ7 454 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 ZBTB45Q96K62 511 aaPredicted RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 ZMAT2Q96NC0 199 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 RTP3Q9BQQ7 232 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 NTPCRQ9BSD7 190 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 RPP25Q9BUL9 199 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 TARS2Q9BW92 718 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 MRPL4Q9BYD3 311 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 RAB34Q9BZG1 259 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 CDT1Q9H211 546 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 PPARGC1AQ9UBK2 798 aaKnown RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 MTRRQ9UBK8 725 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 CDH7Q9ULB5 785 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 COA3Q9Y2R0 106 aaPredicted RBP5.64□□□□□ -1.51
ATM-224ENST00000534625 FRYLO94915 3013 aa5.64□□□□□ -1.51
ATM-224ENST00000534625 I3L4J1 428 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 DDX3XO00571 662 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATM-224ENST00000534625 SLC16A4O15374 487 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 TBC1D4O60343 1298 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 POU2F2P09086 479 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 MCF2P10911 925 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 KCNE1P15382 129 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 ZNF28P17035 718 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 TNFRSF1AP19438 455 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 DNAJA1P31689 397 aaKnown RBP5.63□□□□□ -1.51
ATM-224ENST00000534625 BRCC3P46736 316 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 SLC12A3P55017 1021 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 ATP2C1P98194 919 aaPredicted RBP5.63□□□□□ -1.51
ATM-224ENST00000534625 RABEP1Q15276 862 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 DDR2Q16832 855 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 ZNF568Q3ZCX4 644 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 RILPL1Q5EBL4 403 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 PPM1LQ5SGD2 360 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 LIN9Q5TKA1 542 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 PARM1Q6UWI2 310 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 ANKS3Q6ZW76 656 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 RTL10Q7L3V2 364 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 ASCL5Q7RTU5 278 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 APBB1IPQ7Z5R6 666 aaPredicted RBP5.63□□□□□ -1.51
ATM-224ENST00000534625 CCDC105Q8IYK2 499 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 SYT2Q8N9I0 419 aaPredicted RBP5.63□□□□□ -1.51
ATM-224ENST00000534625 TMEM161BQ8NDZ6 487 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 SLC7A14Q8TBB6 771 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 LRRC15Q8TF66 581 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 FGF13Q92913 245 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 FGF14Q92915 247 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 C18orf25Q96B23 403 aaPredicted RBP5.63□□□□□ -1.51
ATM-224ENST00000534625 CHAMP1Q96JM3 812 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 SNX27Q96L92 541 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 DRC1Q96MC2 740 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 UROC1Q96N76 676 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 ACAP3Q96P50 834 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 PLIN2Q99541 437 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 IER2Q9BTL4 223 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 TIPINQ9BVW5 301 aa5.63□□□□□ -1.51
ATM-224ENST00000534625 CCDC94Q9BW85 323 aaPredicted RBP5.63□□□□□ -1.51
ATM-224ENST00000534625 SSBP3Q9BWW4 388 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms