RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 MCM7P33993 719 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 SMTNP53814 917 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 CDH8P55286 799 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 PSMC1P62191 440 aaKnown RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 NOP14P78316 857 aaKnown RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 IFRD2Q12894 506 aaPredicted RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 BNIP3Q12983 259 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 STK3Q13188 491 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 ZNF234Q14588 700 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 IGFBP7Q16270 282 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 C3orf38Q5JPI3 329 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 CDCP2Q5VXM1 449 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 TDRD10Q5VZ19 366 aaKnown RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 FAM171BQ6P995 826 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 TPGS1Q6ZTW0 290 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 USP53Q70EK8 1073 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 KANSL1Q7Z3B3 1105 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 OR2T3Q8NH03 318 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 BHMTQ93088 406 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 SKA1Q96BD8 255 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 CCNL2Q96S94 520 aaPredicted RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 SEMA3CQ99985 751 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 SYT15Q9BQS2 421 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 BTBD1Q9H0C5 482 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 ASB7Q9H672 318 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 THAP10Q9P2Z0 257 aaPredicted RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 MAGEC2Q9UBF1 373 aaPredicted RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 ATXN7L1Q9ULK2 861 aaPredicted RBP6.83□□□□□ -1.32
CD44-237ENST00000534082 SATB2Q9UPW6 733 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 SNX14Q9Y5W7 946 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 CKAP5Q14008 2032 aa6.83□□□□□ -1.32
CD44-237ENST00000534082 POLQO75417 2590 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 PLXNA2O75051 1894 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 A0A0B4J269 797 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 A0A1W2PNU3 283 aaPredicted RBP6.82□□□□□ -1.32
CD44-237ENST00000534082 TTLL8A6PVC2 850 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 E9PMD0 336 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 F8VP50 259 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 EFSO43281 561 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 SIGLEC6O43699 453 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 OPA1O60313 960 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 DTNBO60941 627 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 CDKL5O76039 1030 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 PIGRP01833 764 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 EPHX1P07099 455 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 OR52Z1P0C646 297 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 ACO1P21399 889 aaKnown RBP6.82□□□□□ -1.32
CD44-237ENST00000534082 GUCY2CP25092 1073 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 POLR2BP30876 1174 aaKnown RBP6.82□□□□□ -1.32
CD44-237ENST00000534082 LHX1P48742 406 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 ACOT2P49753 483 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 INHBCP55103 352 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 DAB2P98082 770 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 RELBQ01201 579 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 CYP27A1Q02318 531 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 TOB2Q14106 344 aaPredicted RBP6.82□□□□□ -1.32
CD44-237ENST00000534082 GEN1Q17RS7 908 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 HECTD3Q5T447 861 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 KIAA0895LQ68EN5 471 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 RINT1Q6NUQ1 792 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 SERPINA13PQ6UXR4 307 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 C1orf186Q6ZWK4 172 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 OXR1Q8N573 874 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 PDZD8Q8NEN9 1154 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 UCMAQ8WVF2 138 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 KCNB2Q92953 911 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 SGF29Q96ES7 293 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 TIPINQ9BVW5 301 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 NACA2Q9H009 215 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 GZF1Q9H116 711 aaPredicted RBP6.82□□□□□ -1.32
CD44-237ENST00000534082 SLC25A18Q9H1K4 315 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 CCSER2Q9H7U1 834 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.82□□□□□ -1.32
CD44-237ENST00000534082 AASDHPPTQ9NRN7 309 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 TMPRSS4Q9NRS4 437 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 PLK2Q9NYY3 685 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 TJP2Q9UDY2 1190 aa6.82□□□□□ -1.32
CD44-237ENST00000534082 OTOGQ6ZRI0 2925 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 A0A1B0GVM2 712 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 A0A1W2PPC4 97 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 A0A1W2PR77 199 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 TRIM38O00635 465 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 GABRDO14764 452 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 GREM1O60565 184 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 SDC3O75056 442 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 ITGB3P05106 788 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 CD38P28907 300 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 RXRGP48443 463 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 CACNA2D1P54289 1103 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 MFAP3P55082 362 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 NCKAP1LP55160 1127 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 NXPH1P58417 271 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 MAPRE1Q15691 268 aaKnown RBP6.81□□□□□ -1.32
CD44-237ENST00000534082 SKIDA1Q1XH10 827 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 TMEM259Q4ZIN3 620 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 SLC39A4Q6P5W5 647 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 HTR3DQ70Z44 454 aa6.81□□□□□ -1.32
CD44-237ENST00000534082 PTRH1Q86Y79 214 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms