RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MNAT1P51948 309 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 ATXN3P54252 364 aaPredicted RBP16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 ATP13A4Q4VNC1 1196 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 DSG4Q86SJ6 1040 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 NETO2Q8NC67 525 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 TSPAN17Q96FV3 270 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 PCED1BQ96HM7 432 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 PCYT2Q99447 389 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 TASP1Q9H6P5 420 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 CD274Q9NZQ7 290 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 NCKAP1Q9Y2A7 1128 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 MYH14Q7Z406 1995 aaKnown RBP16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 NEDD8-MDP1E9PL57 170 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 ZNF143P52747 638 aaPredicted RBP16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 MAP3K10Q02779 954 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 MAPK7Q13164 816 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 PTK6Q13882 451 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 LPIN1Q14693 890 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 WDR75Q8IWA0 830 aaKnown RBP16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 C4orf33Q8N1A6 199 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 CFAP52Q8N1V2 620 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 FGD4Q96M96 766 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 CFLARO15519 480 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 SPRP35270 261 aaPredicted RBP16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 MROH9Q5TGP6 573 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 FBXL19Q6PCT2 694 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 LZTR1Q8N653 840 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 FLRT1Q9NZU1 646 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 HEATR9A2RTY3 570 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 SRP72O76094 671 aaKnown RBP16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 BCL2L1Q07817 233 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 MRNIPQ6NTE8 343 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 CCDC197Q8NCU1 140 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 SPATA20Q8TB22 786 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 PITPNM3Q9BZ71 974 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 SUN2Q9UH99 717 aa16.17■□□□□ 0.18
PPFIA1-222ENST00000532504 CYBAP13498 195 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 ITGALP20701 1170 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 SMARCB1Q12824 385 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 TCEA2Q15560 299 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 MORN1Q5T089 497 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 OR2W6PQ8NHA6 318 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 ZBTB18Q99592 522 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 LPIN3Q9BQK8 851 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 GOLGA8QA0A0J9YX86 632 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 GOLGA8OA6NCC3 632 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 GOLGA8NF8WBI6 632 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 TRIM16O95361 564 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 ACOX1Q15067 660 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 MEI1Q5TIA1 1274 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 HTR3CQ8WXA8 447 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 SGF29Q96ES7 293 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 PPP1R36Q96LQ0 422 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 OMDQ99983 421 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 SNRNP25Q9BV90 132 aaKnown RBP16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 STXBP5LQ9Y2K9 1186 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 SUPT3HB4E1H0 165 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 SUPT3HO75486 399 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 LRRN4Q8WUT4 740 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 MPP6Q9NZW5 540 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 MORC2Q9Y6X9 1032 aaPredicted RBP16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 TADA3O75528 432 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 CRTAMO95727 393 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 LIG3P49916 1009 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 PTAR1Q7Z6K3 402 aaPredicted RBP16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 TRABDQ9H4I3 376 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 SLX4Q8IY92 1834 aa16.16■□□□□ 0.18
PPFIA1-222ENST00000532504 IRF2BP1Q8IU81 584 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 ACBD6Q9BR61 282 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 RNF103O00237 685 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 ATP8B1O43520 1251 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 ERBB2P04626 1255 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 PRKCIP41743 596 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 MMP13P45452 471 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 KCNK16Q96T55 309 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 SDR42E2A6NKP2 422 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 PER2O15055 1255 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 DIAPH2O60879 1101 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 GYS2P54840 703 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 CENPKQ9BS16 269 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 FRMD8P1Q9BZ68 369 aaPredicted RBP16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 CASS4Q9NQ75 786 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 MATKP42679 507 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 DOK6Q6PKX4 331 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 EXOC2Q96KP1 924 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 DCTN4Q9UJW0 460 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 FBXO10Q9UK96 956 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 SHOC2Q9UQ13 582 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 MYH13Q9UKX3 1938 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 CAND2O75155 1236 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 USP12O75317 370 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 PDCD7Q8N8D1 485 aaKnown RBP16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 SNX31Q8N9S9 440 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 FLCNQ8NFG4 579 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 BAP1Q92560 729 aa16.15■□□□□ 0.18
PPFIA1-222ENST00000532504 CPXM1Q96SM3 734 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms