RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 GPR88Q9GZN0 384 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ELOVL4Q9GZR5 314 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ATXN3LQ9H3M9 355 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SMOC2Q9H3U7 446 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLITRK6Q9H5Y7 841 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZNF334Q9HCZ1 680 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 BRD7Q9NPI1 651 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 KLHL11Q9NVR0 708 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 EHD2Q9NZN4 543 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 GMIPQ9P107 970 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 MAGED2Q9UNF1 606 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 POLR3KQ9Y2Y1 108 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 COQ4Q9Y3A0 265 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SCN1AP35498 2009 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TMEM221A6NGB7 291 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 F8VP50 259 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 M0R296 226 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 CLDN5O00501 218 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 NRG2O14511 850 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 PMM2O15305 246 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 P4HA2O15460 535 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 NARSO43776 548 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 ECI2O75521 394 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 NOL4O94818 638 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 AFPP02771 609 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 PF4V1P10720 104 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 VDRP11473 427 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 SRFP11831 508 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 BMP2P12643 396 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 RHOQP17081 205 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 HMGA1P17096 107 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 BPIP17213 487 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TBXAS1P24557 533 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 IGFALSP35858 605 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 MTIF2P46199 727 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 YWHAEP62258 255 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 CYP4F8P98187 520 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 CUL2Q13617 745 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 CCDC183Q5T5S1 534 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 RBM43Q6ZSC3 357 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 GAREM2Q75VX8 874 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM35AQ86V20 835 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM114A1Q8IWE2 563 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 FUKQ8N0W3 1084 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 STKLD1Q8NE28 680 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC2A14Q8TDB8 520 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 FGF14Q92915 247 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 SMARCD2Q92925 531 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 SMARCD1Q96GM5 515 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 SPATA17Q96L03 361 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 CNOT6LQ96LI5 555 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 MYRFLQ96LU7 910 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 HEXIM2Q96MH2 286 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 NT5C1BQ96P26 610 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TWNKQ96RR1 684 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 KXD1Q9BQD3 176 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 RPP25Q9BUL9 199 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 THAP9Q9H5L6 903 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM124BQ9H5Z6 455 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TASP1Q9H6P5 420 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZFP14Q9HCL3 533 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 OSGEPQ9NPF4 335 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 KRT82Q9NSB4 513 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 CISHQ9NSE2 258 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM49BQ9NUQ9 324 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TOR4AQ9NXH8 423 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 UXTQ9UBK9 157 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 HMGXB4Q9UGU5 601 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 POLG2Q9UHN1 485 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 FBXL21Q9UKT6 434 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 PHTF1Q9UMS5 762 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 DUSP12Q9UNI6 340 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TNPO3Q9Y5L0 923 aaKnown RBP6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TSC2P49815 1807 aa6.1□□□□□ -1.43
HMGB1P42-201ENST00000532126 TTC28Q96AY4 2481 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 A0A0C4DFX4 3053 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 SOBPA7XYQ1 873 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 PRR33A8MZF0 331 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 K7ESF4 209 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CAPN5O15484 640 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 GDF9O60383 454 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 SASH3O75995 380 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZRANB2O95218 330 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 HTR3BO95264 441 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 F11P03951 625 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM200BP0CF97 657 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 SETSIPP0DME0 302 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CCDC130P13994 396 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 NME1P15531 152 aaKnown RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 FCARP24071 287 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 DDX6P26196 483 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 ADORA2BP29275 332 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 SOX18P35713 384 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 AVPR1AP37288 418 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 VIPR2P41587 438 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CACNA2D1P54289 1103 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 GPC5P78333 572 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 GABREP78334 506 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 PDE1CQ14123 709 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 STX1AQ16623 288 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms