RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PLXNA2O75051 1894 aa18.15■□□□□ 0.5
PKP3-208ENST00000531857 GOLGA4Q13439 2230 aaKnown RBP18.14■□□□□ 0.49
PKP3-208ENST00000531857 A0A1B0GVT2 93 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 CER1O95813 267 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 EPHX1P07099 455 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 ATXN1LP0C7T5 689 aaKnown RBP18.14■□□□□ 0.49
PKP3-208ENST00000531857 ZNF883P0CG24 379 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 PDZD3Q86UT5 571 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 MARCH9Q86YJ5 346 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 CPXM2Q8N436 756 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 CDK5RAP1Q96SZ6 601 aaKnown RBP18.14■□□□□ 0.49
PKP3-208ENST00000531857 IMPG2Q9BZV3 1241 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 MMRN2Q9H8L6 949 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 MARCH2Q9P0N8 246 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 KIAA1522Q9P206 1035 aaPredicted RBP18.14■□□□□ 0.49
PKP3-208ENST00000531857 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
PKP3-208ENST00000531857 SLC12A8A0AV02 714 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 CYBBP04839 570 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 ACADMP11310 421 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 HLA-EP13747 358 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 CSNK1EP49674 416 aaKnown RBP18.13■□□□□ 0.49
PKP3-208ENST00000531857 EIF4HQ15056 248 aaKnown RBP18.13■□□□□ 0.49
PKP3-208ENST00000531857 SOWAHCQ53LP3 525 aaPredicted RBP18.13■□□□□ 0.49
PKP3-208ENST00000531857 SERPINA13PQ6UXR4 307 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 DBX2Q6ZNG2 339 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 DDI1Q8WTU0 396 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 HEXIM2Q96MH2 286 aaKnown RBP18.13■□□□□ 0.49
PKP3-208ENST00000531857 C6orf106Q9H6K1 298 aaPredicted RBP18.13■□□□□ 0.49
PKP3-208ENST00000531857 TRAF3IP3Q9Y228 551 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 BTBD3Q9Y2F9 522 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 RAXQ9Y2V3 346 aa18.13■□□□□ 0.49
PKP3-208ENST00000531857 MAPK13O15264 365 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 CALUO43852 315 aaPredicted RBP18.12■□□□□ 0.49
PKP3-208ENST00000531857 F13A1P00488 732 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 ACSL1P33121 698 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 YWHAGP61981 247 aaKnown RBP eCLIP18.12■□□□□ 0.49
PKP3-208ENST00000531857 IL27RAQ6UWB1 636 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 RSRC2Q7L4I2 434 aaKnown RBP18.12■□□□□ 0.49
PKP3-208ENST00000531857 TMPRSS7Q7RTY8 843 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 PIGZQ86VD9 579 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 FAM217AQ8IXS0 508 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 ZNF366Q8N895 744 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 RHBDD1Q8TEB9 315 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 HNRNPLLQ8WVV9 542 aaKnown RBP18.12■□□□□ 0.49
PKP3-208ENST00000531857 SNX19Q92543 992 aa18.12■□□□□ 0.49
PKP3-208ENST00000531857 NDRG1Q92597 394 aaKnown RBP18.12■□□□□ 0.49
PKP3-208ENST00000531857 GOLGA8CPA6NN73 597 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 DKK1O94907 266 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 NR2F2P24468 414 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 HOXD9P28356 352 aaPredicted RBP18.11■□□□□ 0.49
PKP3-208ENST00000531857 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
PKP3-208ENST00000531857 CAMK2GQ13555 558 aaPredicted RBP18.11■□□□□ 0.49
PKP3-208ENST00000531857 KIF19Q2TAC6 998 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 RAB41Q5JT25 222 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 SLC4A11Q8NBS3 891 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 OR2T3Q8NH03 318 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 CYB5D2Q8WUJ1 264 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 SEMA4DQ92854 862 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 ARID3AQ99856 593 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 SLC2A11Q9BYW1 496 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 STRIP2Q9ULQ0 834 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 MAPK8IP1Q9UQF2 711 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 PCDHGB2Q9Y5G2 931 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 SNX11Q9Y5W9 270 aa18.11■□□□□ 0.49
PKP3-208ENST00000531857 URB1O60287 2271 aaKnown RBP18.1■□□□□ 0.49
PKP3-208ENST00000531857 A0A1B0GVL5 298 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 TULP2O00295 520 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 KCNK3O14649 394 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 FLRT2O43155 660 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 TIMM44O43615 452 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 TSPAN3O60637 253 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 HLA-FP30511 346 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 AFF3P51826 1226 aaKnown RBP18.1■□□□□ 0.49
PKP3-208ENST00000531857 RAD23BP54727 409 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 ARID5AQ03989 594 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 DNM1Q05193 864 aaKnown RBP18.1■□□□□ 0.49
PKP3-208ENST00000531857 PKP1Q13835 747 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 TRIP4Q15650 581 aaPredicted RBP18.1■□□□□ 0.49
PKP3-208ENST00000531857 ATL3Q6DD88 541 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 LAYNQ6UX15 382 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 INTS8Q75QN2 995 aaKnown RBP18.1■□□□□ 0.49
PKP3-208ENST00000531857 BHLHA9Q7RTU4 235 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 FAM186BQ8IYM0 893 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 ARHGAP18Q8N392 663 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 PLD4Q96BZ4 506 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 UBXN6Q9BZV1 441 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 TMEM245Q9H330 911 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 CISHQ9NSE2 258 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 RCOR1Q9UKL0 485 aa18.1■□□□□ 0.49
PKP3-208ENST00000531857 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.1■□□□□ 0.495e-7■■■■□ 23.7
PKP3-208ENST00000531857 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.1■□□□□ 0.49
PKP3-208ENST00000531857 NYNRINQ9P2P1 1898 aaKnown RBP18.09■□□□□ 0.49
PKP3-208ENST00000531857 GCN1Q92616 2671 aaKnown RBP18.09■□□□□ 0.49
PKP3-208ENST00000531857 PRR29P0C7W0 189 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 KRT13P13646 458 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 PFKFB1P16118 471 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 TKTL1P51854 596 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 E2F5Q15329 346 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 NFIL3Q16649 462 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 FNDC3BQ53EP0 1204 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms