RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 TRIM24O15164 1050 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 MSI1O43347 362 aaKnown RBP13.08□□□□□ -0.32
C11orf54-210ENST00000531516 ACSL4O60488 711 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 TSPAN3O60637 253 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 MOCS3O95396 460 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 GLI1P08151 1106 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 ACADMP11310 421 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 TGM1P22735 817 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 CDK17Q00537 523 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 PDCLQ13371 301 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 GJB7Q6PEY0 223 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 SERPINA13PQ6UXR4 307 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 BHLHA9Q7RTU4 235 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 RABEPKQ7Z6M1 372 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 TMEM110Q86TL2 294 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 IRF2BP1Q8IU81 584 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 FAM217AQ8IXS0 508 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 AHI1Q8N157 1196 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 OLIG1Q8TAK6 271 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 ENOX1Q8TC92 643 aaKnown RBP13.08□□□□□ -0.32
C11orf54-210ENST00000531516 DQX1Q8TE96 717 aaKnown RBP13.08□□□□□ -0.32
C11orf54-210ENST00000531516 RNF34Q969K3 372 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 SLC4A5Q9BY07 1137 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 LHX5Q9H2C1 402 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 ZDHHC4Q9NPG8 344 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 TJP2Q9UDY2 1190 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 STOML2Q9UJZ1 356 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 STON1Q9Y6Q2 735 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 FANCMQ8IYD8 2048 aa13.08□□□□□ -0.32
C11orf54-210ENST00000531516 ZNF292O60281 2723 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 MYH10P35580 1976 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 E5RJQ4 531 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 SLC30A4O14863 429 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 TBL1XO60907 577 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 HSF2BPO75031 334 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 POLR2EP19388 210 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 ABCB4P21439 1286 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 HOXC13P31276 330 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 RPL34P49207 117 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 ST8SIA6P61647 398 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 RPL6Q02878 288 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 FNDC3BQ53EP0 1204 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 HSP90AA4PQ58FG1 418 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 TCP11X2Q5H9J9 407 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 LYSMD4Q5XG99 296 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 KIAA1324Q6UXG2 1013 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 ZDHHC17Q8IUH5 632 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 ATP6V0D2Q8N8Y2 350 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 TMEM35BQ8NCS4 154 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 CLEC4CQ8WTT0 213 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 RLN3Q8WXF3 142 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 PIGKQ92643 395 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 PPP1R9BQ96SB3 815 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 NUSAP1Q9BXS6 441 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 CALCOCO1Q9P1Z2 691 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 THAP10Q9P2Z0 257 aaPredicted RBP13.07□□□□□ -0.32
C11orf54-210ENST00000531516 DAAM1Q9Y4D1 1078 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 PAXBP1Q9Y5B6 917 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 OTOGLQ3ZCN5 2332 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 GPR179Q6PRD1 2367 aa13.07□□□□□ -0.32
C11orf54-210ENST00000531516 MOCS2O96007 188 aaPredicted RBP13.06□□□□□ -0.32
C11orf54-210ENST00000531516 CALCAP01258 141 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 EPHX1P07099 455 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
C11orf54-210ENST00000531516 GABRG2P18507 467 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 CDK11BP21127 795 aaKnown RBP13.06□□□□□ -0.32
C11orf54-210ENST00000531516 OXTRP30559 389 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 HOXD12P35452 270 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 LIMK1P53667 647 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 ATXN3P54252 364 aaPredicted RBP13.06□□□□□ -0.32
C11orf54-210ENST00000531516 SFSWAPQ12872 951 aaKnown RBP13.06□□□□□ -0.32
C11orf54-210ENST00000531516 LMAN2Q12907 356 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 CDH18Q13634 790 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 CCDC6Q16204 474 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 GEN1Q17RS7 908 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 DCAF6Q58WW2 860 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 PLA2G2CQ5R387 149 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 PIK3R6Q5UE93 754 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 DAB2IPQ5VWQ8 1189 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 OR6B2Q6IFH4 312 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 LRSAM1Q6UWE0 723 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 C11orf57Q6ZUT1 292 aaPredicted RBP13.06□□□□□ -0.32
C11orf54-210ENST00000531516 SND1Q7KZF4 910 aaKnown RBP eCLIP13.06□□□□□ -0.32
C11orf54-210ENST00000531516 CHST9Q7L1S5 443 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 MFN1Q8IWA4 741 aa13.06□□□□□ -0.32
C11orf54-210ENST00000531516 CEP76Q8TAP6 659 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms