RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 MTO1Q9Y2Z2 717 aaKnown RBP5.98□□□□□ -1.45
CD44-231ENST00000531110 FAM169AQ9Y6X4 670 aa5.98□□□□□ -1.45
CD44-231ENST00000531110 KDM5BQ9UGL1 1544 aa5.98□□□□□ -1.45
CD44-231ENST00000531110 CPSF1Q10570 1443 aaKnown RBP5.98□□□□□ -1.45
CD44-231ENST00000531110 SPATA31A3Q5VYP0 1347 aa5.98□□□□□ -1.45
CD44-231ENST00000531110 PHLPP2Q6ZVD8 1323 aa5.98□□□□□ -1.45
CD44-231ENST00000531110 SYNMO15061 1565 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 PLXNC1O60486 1568 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 HTR3EA5X5Y0 456 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 E9PLN8 166 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 CASQ2O14958 399 aaPredicted RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 ZC3H11AO75152 810 aaKnown RBP eCLIP5.97□□□□□ -1.45
CD44-231ENST00000531110 URI1O94763 535 aaPredicted RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 SPDEFO95238 335 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 EGR2P11161 476 aaPredicted RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 PTPN2P17706 415 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 RXRAP19793 462 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 AARSP49588 968 aaKnown RBP eCLIP5.97□□□□□ -1.45
CD44-231ENST00000531110 GNAQP50148 359 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 ANXA11P50995 505 aaKnown RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 SCAPQ12770 1279 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 UBE4AQ14139 1066 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 HLTFQ14527 1009 aaKnown RBP eCLIP5.97□□□□□ -1.45
CD44-231ENST00000531110 HLXQ14774 488 aaPredicted RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 MAPRE2Q15555 327 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 ELF2Q15723 593 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 PLEKHO1Q53GL0 409 aaPredicted RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 CFAP58Q5T655 872 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 PDXDC1Q6P996 788 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 LVRNQ6Q4G3 990 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 BZW1Q7L1Q6 419 aaKnown RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 NANOGNBQ7Z5D8 188 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 GRAMD2AQ8IUY3 354 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 SPARTQ8N0X7 666 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 SCAIQ8N9R8 606 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 SPERTQ8NA61 448 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 GSDMBQ8TAX9 411 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 POC1BQ8TC44 478 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 KBTBD7Q8WVZ9 684 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 MAIP1Q8WWC4 291 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 NCSTNQ92542 709 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 LARP4BQ92615 738 aaKnown RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 TSR2Q969E8 191 aaKnown RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 SKA1Q96BD8 255 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 CDCA5Q96FF9 252 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 C8orf48Q96LL4 319 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 SMOQ99835 787 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 VKORC1Q9BQB6 163 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 UQCC2Q9BRT2 126 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 PUS3Q9BZE2 481 aaKnown RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 IMPG2Q9BZV3 1241 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 TINAGL1Q9GZM7 467 aaPredicted RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 MIS12Q9H081 205 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 PCED1AQ9H1Q7 454 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 VCPKMTQ9H867 229 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 RSAD1Q9HA92 442 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 TMEM165Q9HC07 324 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 TCP11L1Q9NUJ3 509 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 PIH1D1Q9NWS0 290 aaKnown RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 PPP1R14DQ9NXH3 145 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 SRRDQ9UH36 339 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 DDX20Q9UHI6 824 aaKnown RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 CDYLQ9Y232 598 aa5.97□□□□□ -1.45
CD44-231ENST00000531110 BLMP54132 1417 aaPredicted RBP5.97□□□□□ -1.45
CD44-231ENST00000531110 FANCD2Q9BXW9 1451 aa5.96□□□□□ -1.45
CD44-231ENST00000531110 TONSLQ96HA7 1378 aa5.96□□□□□ -1.45
CD44-231ENST00000531110 CCDC78A2IDD5 438 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 ZNF785A8K8V0 405 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 MCF2LO15068 1137 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 NVLO15381 856 aaKnown RBP5.96□□□□□ -1.46
CD44-231ENST00000531110 PHGDHO43175 533 aaKnown RBP5.96□□□□□ -1.46
CD44-231ENST00000531110 SULT1B1O43704 296 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 STRNO43815 780 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 ZNF254O75437 659 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 DAB1O75553 588 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 TCEA3O75764 348 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 THP07101 528 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 IDEP14735 1019 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 ALDH3A1P30838 453 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 HOXC13P31276 330 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 PRKAR1BP31321 381 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 ACADSBP45954 432 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 AVPR1BP47901 424 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 ZNF135P52742 658 aaPredicted RBP5.96□□□□□ -1.46
CD44-231ENST00000531110 BLVRAP53004 296 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 CACNB3P54284 484 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 B2MP61769 119 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 RPS7P62081 194 aaKnown RBP5.96□□□□□ -1.46
CD44-231ENST00000531110 CYP4A11Q02928 519 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 PPP1R7Q15435 360 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 PROSER3Q2NL68 480 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 ARHGAP29Q52LW3 1261 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 KHDC1LQ5JSQ8 128 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 CYP4A22Q5TCH4 519 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 MEX3CQ5U5Q3 659 aaKnown RBP5.96□□□□□ -1.46
CD44-231ENST00000531110 TBC1D9BQ66K14 1250 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 NPNTQ6UXI9 565 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 MAEAQ7L5Y9 396 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 LNX2Q8N448 690 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 DCLK2Q8N568 766 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms