RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 EDC3Q96F86 508 aaKnown RBP12.97□□□□□ -0.33
PDE4DIP-227ENST00000529945 TEKT5Q96M29 485 aa12.97□□□□□ -0.33
PDE4DIP-227ENST00000529945 UGT2B28Q9BY64 529 aa12.97□□□□□ -0.33
PDE4DIP-227ENST00000529945 LRRC40Q9H9A6 602 aa12.97□□□□□ -0.33
PDE4DIP-227ENST00000529945 IQGAP2Q13576 1575 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 SASH3O75995 380 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 BMP10O95393 424 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 PLET1Q6UQ28 207 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 C10orf107Q8IVU9 208 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 MREGQ8N565 214 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 EMC1Q8N766 993 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 PDLIM2Q96JY6 352 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 CCDC154A6NI56 674 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 TIPRLO75663 272 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 DNAJA4Q8WW22 397 aaPredicted RBP12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 C14orf93Q9H972 538 aaKnown RBP12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 GPRC5DQ9NZD1 345 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 EIF3KQ9UBQ5 218 aaKnown RBP12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 SSR3Q9UNL2 185 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 ERGIC3Q9Y282 383 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 FAM240BA0A1B0GVZ2 78 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 EYA2O00167 538 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 ADORA2BP29275 332 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 CCR4P51679 360 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 ZNF772Q68DY9 489 aaPredicted RBP12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 DGLUCYQ7Z3D6 616 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 RAB43Q86YS6 212 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 CCDC126Q96EE4 140 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 FAM120BQ96EK7 910 aaKnown RBP12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 TIMMDC1Q9NPL8 285 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 GRHL1Q9NZI5 618 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 RAB4AP20338 218 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 BROXQ5VW32 411 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 PDPK2PQ6A1A2 396 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 KYQ8NBH2 561 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 MED8Q96G25 268 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 FAM111AQ96PZ2 611 aa12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
PDE4DIP-227ENST00000529945 MECP2P51608 486 aaKnown RBP12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 MGAT5Q09328 741 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 ATG9AQ7Z3C6 839 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 OR2W6PQ8NHA6 318 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 OSBP2Q969R2 916 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 LIMD1Q9UGP4 676 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 LDLRP01130 860 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 C9P02748 559 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 RALAP11233 206 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 SCGB2A2Q13296 93 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 DENND1BQ6P3S1 775 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 OR52L1Q8NGH7 329 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 C12orf66Q96MD2 445 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 TRNT1Q96Q11 434 aaKnown RBP12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 TREM1Q9NP99 234 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 EVPLQ92817 2033 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 GRIK1P39086 918 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 NFATC2IPQ8NCF5 419 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 MYDGFQ969H8 173 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 VPS33BQ9H267 617 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 ARHGAP28Q9P2N2 729 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 CKLFQ9UBR5 152 aa12.96□□□□□ -0.34
PDE4DIP-227ENST00000529945 VCLP18206 1134 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 MAGP20916 626 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 ECHS1P30084 290 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 SLC34A1Q06495 639 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 HAGHLQ6PII5 290 aaPredicted RBP12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 KCTD1Q719H9 257 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 KCNK18Q7Z418 384 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 ZNF649Q9BS31 505 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 TBCDQ9BTW9 1192 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 MKNK1Q9BUB5 465 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 CCRL2O00421 344 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 MTSS1O43312 755 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 ALDH1A1P00352 501 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 ZNF3P17036 446 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 MTAPQ13126 283 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 MTM1Q13496 603 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 HSDL1Q3SXM5 330 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 PLEKHF1Q96S99 279 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 PPEF2O14830 753 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 SPARCP09486 303 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 SULT1E1P49888 294 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 GPC3P51654 580 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 PEX3P56589 373 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 PDXDC2PQ6P474 469 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 RCOR2Q8IZ40 523 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 PABPC5Q96DU9 382 aaKnown RBP12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 C11orf24Q96F05 449 aaPredicted RBP12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 Q96MT0 163 aa12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 TRIT1Q9H3H1 467 aaKnown RBP12.95□□□□□ -0.34
PDE4DIP-227ENST00000529945 SHOC2Q9UQ13 582 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms