RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ATF6P18850 670 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ITIH1P19827 911 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 NFKB1P19838 968 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 FGFR4P22455 802 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 CCNE1P24864 410 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ITGB7P26010 798 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 TRIM23P36406 574 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 SLC26A3P40879 764 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ALDH1A3P47895 512 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 SLC9A3P48764 834 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 POLD2P49005 469 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 MAPKAPK2P49137 400 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 KLK7P49862 253 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 TOB1P50616 345 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 ALDH18A1P54886 795 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 SSRP1Q08945 709 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 TEFQ10587 303 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 CDC20Q12834 499 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ITGADQ13349 1161 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 RAPGEF1Q13905 1077 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 MPP2Q14168 576 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 POU6F1Q14863 301 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ACAP1Q15027 740 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 SNX17Q15036 470 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 DLGAP5Q15398 846 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 MAN2A1Q16706 1144 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 DUSP7Q16829 419 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 LONRF1Q17RB8 773 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 LEXMQ3ZCV2 418 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 C4orf46Q504U0 113 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 MIIPQ5JXC2 388 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ATAD3BQ5T9A4 648 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 HGSNATQ68CP4 663 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 FCRLBQ6BAA4 426 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ERAP2Q6P179 960 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 CORO6Q6QEF8 472 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 DBX2Q6ZNG2 339 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 RALYLQ86SE5 291 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 CCDC25Q86WR0 208 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 CDR2LQ86X02 465 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 RALGPS2Q86X27 583 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 MB21D2Q8IYB1 491 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 RTKN2Q8IZC4 609 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 FAM109AQ8N4B1 249 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ABTB2Q8N961 1025 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 SLC4A11Q8NBS3 891 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 TTLQ8NG68 377 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 NCOA7Q8NI08 942 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 SLC2A14Q8TDB8 520 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 DENND1AQ8TEH3 1009 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ZFPM2Q8WW38 1151 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 PSPC1Q8WXF1 523 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 PMM1Q92871 262 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 TTC17Q96AE7 1141 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 VPS33AQ96AX1 596 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 C12orf43Q96C57 262 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 EAF2Q96CJ1 260 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 NLRP4Q96MN2 994 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 METTL22Q9BUU2 404 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 SLC2A11Q9BYW1 496 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 TRIM31Q9BZY9 425 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 TRIM15Q9C019 465 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 SLA2Q9H6Q3 261 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 ZFYVE28Q9HCC9 887 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 CPNE5Q9HCH3 593 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 NPHS2Q9NP85 383 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 WASH6PQ9NQA3 447 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 TPSG1Q9NRR2 321 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 FAM207AQ9NSI2 230 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 SNTG2Q9NY99 539 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 MAP3K20Q9NYL2 800 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 KLK14Q9P0G3 267 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 CEP72Q9P209 647 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 PCYOX1Q9UHG3 505 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 IP6K2Q9UHH9 426 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 PTBP2Q9UKA9 531 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 APPL1Q9UKG1 709 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 VPS4AQ9UN37 437 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 POLIQ9UNA4 740 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 PACSIN2Q9UNF0 486 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 EIF3LQ9Y262 564 aaKnown RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 BCS1LQ9Y276 419 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 AP3M1Q9Y2T2 418 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 SNX24Q9Y343 169 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 PCDHGA8Q9Y5G5 932 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 AHDC1Q5TGY3 1603 aaPredicted RBP5.99□□□□□ -1.45
CD44-225ENST00000527326 EMSYQ7Z589 1322 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 KDM3AQ9Y4C1 1321 aa5.99□□□□□ -1.45
CD44-225ENST00000527326 A0A1B0GUL6 1792 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SPEF2Q9C093 1822 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 MYO5BQ9ULV0 1848 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 A0A087X0B3 334 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PNMA6FA0A0J9YX94 578 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SMCO2A6NFE2 343 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 LRRIQ4A6NIV6 560 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 TSPY2A6NKD2 308 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 H3BRJ5 948 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 GIPC1O14908 333 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 NCAM2O15394 837 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 DYRK3O43781 588 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms