RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 P2RY11Q96G91 374 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 KREMEN1Q96MU8 473 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 TRIM62Q9BVG3 475 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 LSM14BQ9BX40 385 aaKnown RBP13.98□□□□□ -0.17
CAPN1-207ENST00000527189 INTS2Q9H0H0 1204 aaKnown RBP13.98□□□□□ -0.17
CAPN1-207ENST00000527189 SMOC1Q9H4F8 434 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 UBE2TQ9NPD8 197 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-207ENST00000527189 ELOVL2Q9NXB9 296 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 CALCOCO1Q9P1Z2 691 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 MBD1Q9UIS9 605 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-207ENST00000527189 STON1Q9Y6Q2 735 aa13.98□□□□□ -0.17
CAPN1-207ENST00000527189 DSPP15924 2871 aaKnown RBP13.97□□□□□ -0.17
CAPN1-207ENST00000527189 IGF2RP11717 2491 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 GABBR2O75899 941 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 IGLV3-27P01718 113 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 LTFP02788 710 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-207ENST00000527189 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
CAPN1-207ENST00000527189 GPD2P43304 727 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 RGS7P49802 495 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 LMAN2Q12907 356 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 STARD3Q14849 445 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 CAMK4Q16566 473 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 GEN1Q17RS7 908 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 DAB2IPQ5VWQ8 1189 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 PEAR1Q5VY43 1037 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-207ENST00000527189 NUGGCQ68CJ6 796 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 KIAA1211LQ6NV74 962 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 RABEPKQ7Z6M1 372 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 TMEFF1Q8IYR6 380 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 ZNF557Q8N988 423 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-207ENST00000527189 CEP76Q8TAP6 659 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 PIGKQ92643 395 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 MRGPRX1Q96LB2 322 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 EDEM2Q9BV94 578 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 CACNA2D2Q9NY47 1150 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 PLXND1Q9Y4D7 1925 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 NUP205Q92621 2012 aa13.97□□□□□ -0.17
CAPN1-207ENST00000527189 LNP1A1A4G5 178 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 GTPBP10A4D1E9 387 aaKnown RBP13.96□□□□□ -0.17
CAPN1-207ENST00000527189 IRAK2O43187 625 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 NDUFV2P19404 249 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 SLC11A2P49281 568 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 IRX4P78413 519 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.17
CAPN1-207ENST00000527189 NNTQ13423 1086 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 ACAP1Q15027 740 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 LYSMD4Q5XG99 296 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 TCEAL6Q6IPX3 200 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 GBP6Q6ZN66 633 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 FRMD1Q8N878 549 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 WFIKKN2Q8TEU8 576 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 ZNF606Q8WXB4 792 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 TCEAL3Q969E4 200 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 NUSAP1Q9BXS6 441 aaKnown RBP13.96□□□□□ -0.17
CAPN1-207ENST00000527189 SLC4A5Q9BY07 1137 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 PILRBQ9UKJ0 227 aa13.96□□□□□ -0.17
CAPN1-207ENST00000527189 SMG1Q96Q15 3661 aaKnown RBP13.95□□□□□ -0.18
CAPN1-207ENST00000527189 IGHV1OR15-9A0A0B4J2B8 117 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 WASH3PC4AMC7 463 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 SYNCRIPO60506 623 aaKnown RBP13.95□□□□□ -0.18
CAPN1-207ENST00000527189 NCAM1P13591 858 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 KRT5P13647 590 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-207ENST00000527189 PTGER3P43115 390 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 ZNF33AQ06730 810 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 SLC23A3Q6PIS1 610 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 TRIM65Q6PJ69 517 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 KIAA0907Q7Z7F0 614 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-207ENST00000527189 TMEM110Q86TL2 294 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 SCUBE3Q8IX30 993 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.95□□□□□ -0.18
CAPN1-207ENST00000527189 ZNF419Q96HQ0 510 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-207ENST00000527189 SERPINB11Q96P15 392 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 MED15Q96RN5 788 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 DDX50Q9BQ39 737 aaKnown RBP13.95□□□□□ -0.18
CAPN1-207ENST00000527189 TMEM9BQ9NQ34 198 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 ITM2CQ9NQX7 267 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 CLEC4EQ9ULY5 219 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 PLA2G4CQ9UP65 541 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 TLR6Q9Y2C9 796 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 RAD54BQ9Y620 910 aa13.95□□□□□ -0.18
CAPN1-207ENST00000527189 LAMA1P25391 3075 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 C4orf47A7E2U8 309 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 PIK3R2O00459 728 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 CDX4O14627 284 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-207ENST00000527189 MSI1O43347 362 aaKnown RBP13.94□□□□□ -0.18
CAPN1-207ENST00000527189 ACSL4O60488 711 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 LETM1O95202 739 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-207ENST00000527189 FYNP06241 537 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 C7P10643 843 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 HLA-FP30511 346 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 OXTRP30559 389 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 GNA15P30679 374 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 IL12RB1P42701 662 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 TBX4P57082 545 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 ARID5AQ03989 594 aa13.94□□□□□ -0.18
CAPN1-207ENST00000527189 ZNF234Q14588 700 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms