RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SGSHP51688 502 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 HADHBP55084 474 aaKnown RBP11.19□□□□□ -0.62
NEDD8-205ENST00000527046 MLLT6P55198 1093 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-205ENST00000527046 MESP2Q0VG99 397 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 NME3Q13232 169 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 DHCR24Q15392 516 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 ARHGAP29Q52LW3 1261 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 PIK3R6Q5UE93 754 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 TXNRD3NBQ6F5E7 133 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 C14orf80Q86SX3 495 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 FAM131BQ86XD5 332 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 CPXM2Q8N436 756 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 CCDC185Q8N715 623 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 UHRF1Q96T88 793 aaPredicted RBP11.19□□□□□ -0.62
NEDD8-205ENST00000527046 NACA2Q9H009 215 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 ECT2Q9H8V3 914 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 FBRSL1Q9HCM7 1045 aaKnown RBP11.19□□□□□ -0.62
NEDD8-205ENST00000527046 MRPL47Q9HD33 250 aaKnown RBP11.19□□□□□ -0.62
NEDD8-205ENST00000527046 DUS2Q9NX74 493 aaKnown RBP11.19□□□□□ -0.62
NEDD8-205ENST00000527046 TRIM10Q9UDY6 481 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 STAP1Q9ULZ2 295 aa11.19□□□□□ -0.62
NEDD8-205ENST00000527046 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 KRBA1A5PL33 1030 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 ANTXRLA6NF34 631 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 BTNL10A8MVZ5 291 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 FAM72CH0Y354 149 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 TRDMT1O14717 391 aaKnown RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 ARHGAP6O43182 974 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 LRCH4O75427 683 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 PAGE1O75459 146 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 LATS1O95835 1130 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 F9P00740 461 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 CYP17A1P05093 508 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 SRFP11831 508 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 SDC4P31431 198 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 RDXP35241 583 aaKnown RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 SOX9P48436 509 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 KPNA1P52294 538 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 VAV2P52735 878 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 ZXDAP98168 799 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 DEUP1Q05D60 604 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 FZD5Q13467 585 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 RUNX3Q13761 415 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 CDO1Q16878 200 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 C5orf22Q49AR2 442 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 MS4A13Q5J8X5 152 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 LY6G5CQ5SRR4 150 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 ADGRF1Q5T601 910 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 FAM72AQ5TYM5 149 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 FYB2Q5VWT5 728 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 ASTLQ6HA08 431 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 FAM72DQ6L9T8 149 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 DCUN1D2Q6PH85 259 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 FAM72BQ86X60 149 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 DDX42Q86XP3 938 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 UNC45BQ8IWX7 931 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 NIPA2Q8N8Q9 360 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 TTC8Q8TAM2 541 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 ZNF564Q8TBZ8 553 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 RFFLQ8WZ73 363 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 EZH1Q92800 747 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 IRF7Q92985 503 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 IGSF8Q969P0 613 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 PRICKLE1Q96MT3 831 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-205ENST00000527046 TKTL2Q9H0I9 626 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 WDCPQ9H6R7 721 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 COX16Q9P0S2 106 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 TBC1D14Q9P2M4 693 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 UVRAGQ9P2Y5 699 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 FBXO10Q9UK96 956 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 NEU3Q9UQ49 428 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 SH3BP1Q9Y3L3 701 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 HS3ST4Q9Y661 456 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 SCINQ9Y6U3 715 aa11.18□□□□□ -0.62
NEDD8-205ENST00000527046 A0A0A6YYK5 440 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-205ENST00000527046 PI4K2BG5E9Z4 385 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 TRIM24O15164 1050 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 PENKP01210 267 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-205ENST00000527046 CISD3P0C7P0 127 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 PSMA2P25787 234 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 MIPP30301 263 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 CCR1P32246 355 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 GBP1P32455 592 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 GJA4P35212 333 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 OPRD1P41143 372 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 SLC6A11P48066 632 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 VCPP55072 806 aaKnown RBP11.17□□□□□ -0.62
NEDD8-205ENST00000527046 TAS2R40P59535 323 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 SEMA3BQ13214 749 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 PDGFRLQ15198 375 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 CA9Q16790 459 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 ATP13A4Q4VNC1 1196 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 SLC44A4Q53GD3 710 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 BRMS1LQ5PSV4 323 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 MANEALQ5VSG8 457 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms