RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SOX2P48431 317 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 COMPP49747 757 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 MTAPQ13126 283 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 IZUMO4Q1ZYL8 232 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 MANEALQ5VSG8 457 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 RTL10Q7L3V2 364 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 ZBTB34Q8NCN2 500 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 AKAP1Q92667 903 aaKnown RBP eCLIP3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 CENPIQ92674 756 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 INPP5DQ92835 1189 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 NMD3Q96D46 503 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 B3GNT5Q9BYG0 378 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 SEZ6LQ9BYH1 1024 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 NMRK2Q9NPI5 230 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 DDX56Q9NY93 547 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 PNMA8BQ9ULN7 279 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 MYO6Q9UM54 1294 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 HPSEQ9Y251 543 aa3.22□□□□□ -1.89
ECHDC1-219ENST00000526299 ZNF335Q9H4Z2 1342 aaPredicted RBP3.21□□□□□ -1.89
ECHDC1-219ENST00000526299 SCN5AQ14524 2016 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 DPPA5A6NC42 116 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 CAPN8A6NHC0 703 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 CTNND1O60716 968 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 SOCS5O75159 536 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 ENO1P06733 434 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 TXNP10599 105 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 DUSP1P28562 367 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 PBX1P40424 430 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 RPS16P62249 146 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 CNGA2Q16280 664 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 KRTAP24-1Q3LI83 254 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 LIPMQ5VYY2 423 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 MZT2AQ6P582 158 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 DHRS13Q6UX07 377 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 MORC1Q86VD1 984 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 RHPN2Q8IUC4 686 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 GJA10Q969M2 543 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 ZDHHC12Q96GR4 267 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 HTATIP2Q9BUP3 242 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 ELOVL1Q9BW60 279 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 C22orf23Q9BZE7 217 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 ZCWPW1Q9H0M4 648 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 ISCUQ9H1K1 167 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 CDT1Q9H211 546 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 C6orf106Q9H6K1 298 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 AFF4Q9UHB7 1163 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 VPS51Q9UID3 782 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 TPCN1Q9ULQ1 816 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 PCDHGB1Q9Y5G3 927 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 COL15A1P39059 1388 aa3.21□□□□□ -1.9
ECHDC1-219ENST00000526299 KIF26BQ2KJY2 2108 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 ISM1B1AKI9 464 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 LDB3O75112 727 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 INMTO95050 263 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 AKR1A1P14550 325 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 CPA1P15085 419 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 HTR7P34969 479 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 RFX2P48378 723 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 PCYT1AP49585 367 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 ZNF84P51523 738 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 DGKQP52824 942 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 FMO1Q01740 532 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 BFSP2Q13515 415 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 ACOX1Q15067 660 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 PGM5Q15124 567 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 AASDHQ4L235 1098 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 HMBOX1Q6NT76 420 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 UNC13DQ70J99 1090 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 OVCH2Q7RTZ1 564 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 CTU1Q7Z7A3 348 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 TPH2Q8IWU9 490 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 SUN3Q8TAQ9 357 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 AIFM3Q96NN9 605 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 TAAR9Q96RI9 348 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 WDR83Q9BRX9 315 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 TM6SF1Q9BZW5 370 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 PCDH12Q9NPG4 1184 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 SIRT3Q9NTG7 399 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 TBC1D23Q9NUY8 699 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 COL20A1Q9P218 1284 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 LAMP3Q9UQV4 416 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
ECHDC1-219ENST00000526299 IFNA2P01563 188 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 PKMP14618 531 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 IL1R1P14778 569 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 ERVFC1-1P60608 527 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 KCNJ12Q14500 433 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 CNN3Q15417 329 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 ANXA2RQ3ZCQ2 193 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 ISM2Q6H9L7 571 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 APOA5Q6Q788 366 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 PRSS57Q6UWY2 283 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 KYAT3Q6YP21 454 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 SRGAP1Q7Z6B7 1085 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 PHF21BQ96EK2 531 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 RHOBTB2Q9BYZ6 727 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 TRIM2Q9C040 744 aa3.19□□□□□ -1.9
ECHDC1-219ENST00000526299 ZNF556Q9HAH1 456 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms