RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TKTL2Q9H0I9 626 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 MTIF3Q9H2K0 278 aaKnown RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CENPHQ9H3R5 247 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 IL23AQ9NPF7 189 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 PIGVQ9NUD9 493 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CWC15Q9P013 229 aaKnown RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 FNIP2Q9P278 1114 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 MTRRQ9UBK8 725 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CLUHO75153 1309 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 MICAL3Q7RTP6 2002 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 A0A087WUV0 522 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 C5orf60A6NFR6 353 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 AP3B1O00203 1094 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 RGS16O15492 202 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 IRAK2O43187 625 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 RIPK2O43353 540 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 B4GALT3O60512 393 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 GCATO75600 419 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 SPAG6O75602 509 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 TTC4O95801 387 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 SYF2O95926 243 aaKnown RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 FYNP06241 537 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 ABHD2P08910 425 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 CSH1P0DML2 217 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 CSH2P0DML3 217 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 GOT1P17174 413 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 TFE3P19532 575 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 AMPD1P23109 780 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 RPL22P35268 128 aaKnown RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 MAGEA4P43358 317 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 ALDH1A3P47895 512 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 PPP3CCP48454 512 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 CDK16Q00536 496 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 ZNF33AQ06730 810 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 HIF1AQ16665 826 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 LRRC26Q2I0M4 334 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 RNASEH2BQ5TBB1 312 aaKnown RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 ITPRIPL1Q6GPH6 555 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 SLC8B1Q6J4K2 584 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 TAOK1Q7L7X3 1001 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 LRRC49Q8IUZ0 686 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 RIBC1Q8N443 379 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 DIS3LQ8TF46 1054 aaKnown RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 TBC1D31Q96DN5 1066 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 PGLYRP2Q96PD5 576 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 RBM15Q96T37 977 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 YME1L1Q96TA2 773 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 VAT1Q99536 393 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 RHOBTB2Q9BYZ6 727 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 TMBIM4Q9HC24 238 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 WDR6Q9NNW5 1121 aaKnown RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 ARHGEF4Q9NR80 690 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 HAUS2Q9NVX0 235 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 ARHGEF38Q9NXL2 777 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 IL37Q9NZH6 218 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 UXTQ9UBK9 157 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 OR12D3Q9UGF7 316 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 AFF4Q9UHB7 1163 aaKnown RBP10.31□□□□□ -0.76
VPS13B-212ENST00000524330 TLR6Q9Y2C9 796 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 CDY1Q9Y6F8 540 aa10.31□□□□□ -0.76
VPS13B-212ENST00000524330 PATJQ8NI35 1801 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 FNDC1Q4ZHG4 1894 aaPredicted RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 A0A1W2PQH9 124 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 NT5C1B-RDH14C9J2C7 533 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 F8W810 466 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 H3BQF6 201 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 AGPSO00116 658 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 RASGRF2O14827 1237 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 PSMD3O43242 534 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 TBC1D4O60343 1298 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 OPHN1O60890 802 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 NEBLO76041 1014 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 IGLV3-25P01717 112 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 FGBP02675 491 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 EPHB2P29323 1055 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 LBX1P52954 281 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 ATXN1P54253 815 aaKnown RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 TBX4P57082 545 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 NRG1Q02297 640 aaPredicted RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 DSG1Q02413 1049 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 NR1H3Q13133 447 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 SLC29A2Q14542 456 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 PRPSAP1Q14558 356 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 DDR2Q16832 855 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 RTP2Q5QGT7 225 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 NCBP2-AS2Q69YL0 99 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 NPNTQ6UXI9 565 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 BHLHA9Q7RTU4 235 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 DDX53Q86TM3 631 aaKnown RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 UNC45BQ8IWX7 931 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 PALM2Q8IXS6 379 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 SLC39A11Q8N1S5 342 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 ZNF276Q8N554 614 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 ATP11CQ8NB49 1132 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 ATAD1Q8NBU5 361 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 CCNYQ8ND76 341 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 SCAMP5Q8TAC9 235 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 ADAM32Q8TC27 787 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms