RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NIF3L1Q9GZT8 377 aa23.81■■□□□ 1.4
PVT1-218ENST00000523328 C6orf106Q9H6K1 298 aaPredicted RBP23.81■■□□□ 1.4
PVT1-218ENST00000523328 MARCH2Q9P0N8 246 aa23.81■■□□□ 1.4
PVT1-218ENST00000523328 FRMD4BQ9Y2L6 1034 aa23.81■■□□□ 1.4
PVT1-218ENST00000523328 TP53BP1Q12888 1972 aaPredicted RBP23.81■■□□□ 1.4
PVT1-218ENST00000523328 ASXL3Q9C0F0 2248 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 MAPK13O15264 365 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 TIMM44O43615 452 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 ACTN4O43707 911 aaKnown RBP23.8■■□□□ 1.4
PVT1-218ENST00000523328 SLFN14P0C7P3 912 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 HLA-EP13747 358 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 ACSL1P33121 698 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 GCLMP48507 274 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 AFF3P51826 1226 aaKnown RBP23.8■■□□□ 1.4
PVT1-218ENST00000523328 PPP3CAQ08209 521 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 KIF19Q2TAC6 998 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 CEP57L1Q8IYX8 460 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 SNX19Q92543 992 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 PAGE5Q96GU1 130 aa23.8■■□□□ 1.4
PVT1-218ENST00000523328 BBC3Q96PG8 261 aaPredicted RBP23.8■■□□□ 1.4
PVT1-218ENST00000523328 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.8■■□□□ 1.4
PVT1-218ENST00000523328 GCN1Q92616 2671 aaKnown RBP23.79■■□□□ 1.4
PVT1-218ENST00000523328 KNTC1P50748 2209 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 SLC12A8A0AV02 714 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 K7ELQ4 463 aaPredicted RBP23.79■■□□□ 1.4
PVT1-218ENST00000523328 TRIM49P0CI25 452 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 TRIM49CP0CI26 452 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 ME1P48163 572 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 CAMK2BQ13554 666 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 ZNF394Q53GI3 561 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 RAB41Q5JT25 222 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 FOXD4L5Q5VV16 416 aaPredicted RBP23.79■■□□□ 1.4
PVT1-218ENST00000523328 FOXD4L4Q8WXT5 416 aaPredicted RBP23.79■■□□□ 1.4
PVT1-218ENST00000523328 LHX5Q9H2C1 402 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 TMEM245Q9H330 911 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 OSGEPQ9NPF4 335 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 STRIP2Q9ULQ0 834 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.79■■□□□ 1.4
PVT1-218ENST00000523328 TRAF3IP3Q9Y228 551 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 SNX11Q9Y5W9 270 aa23.79■■□□□ 1.4
PVT1-218ENST00000523328 PDIA4P13667 645 aaKnown RBP23.78■■□□□ 1.4
PVT1-218ENST00000523328 HOXD9P28356 352 aaPredicted RBP23.78■■□□□ 1.4
PVT1-218ENST00000523328 HLA-FP30511 346 aa23.78■■□□□ 1.4
PVT1-218ENST00000523328 SUZ12Q15022 739 aaKnown RBP23.78■■□□□ 1.4
PVT1-218ENST00000523328 FOXD4L6Q3SYB3 417 aaPredicted RBP23.78■■□□□ 1.4
PVT1-218ENST00000523328 FOXD4L3Q6VB84 417 aaPredicted RBP23.78■■□□□ 1.4
PVT1-218ENST00000523328 PIGZQ86VD9 579 aa23.78■■□□□ 1.4
PVT1-218ENST00000523328 ARHGAP18Q8N392 663 aa23.78■■□□□ 1.4
PVT1-218ENST00000523328 PLD4Q96BZ4 506 aa23.78■■□□□ 1.4
PVT1-218ENST00000523328 UBXN6Q9BZV1 441 aa23.78■■□□□ 1.4
PVT1-218ENST00000523328 TM9SF3Q9HD45 589 aa23.78■■□□□ 1.4
PVT1-218ENST00000523328 ANKRD6Q9Y2G4 727 aa23.78■■□□□ 1.4
PVT1-218ENST00000523328 TRABD2BA6NFA1 517 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 GOLGA8CPA6NN73 597 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 GRIA4P48058 902 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 YWHAGP61981 247 aaKnown RBP eCLIP23.77■■□□□ 1.4
PVT1-218ENST00000523328 ARID5AQ03989 594 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 CYP4F3Q08477 520 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 TRIP4Q15650 581 aaPredicted RBP23.77■■□□□ 1.4
PVT1-218ENST00000523328 PTPRNQ16849 979 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 MPPE1Q53F39 396 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 RSRC2Q7L4I2 434 aaKnown RBP23.77■■□□□ 1.4
PVT1-218ENST00000523328 GALNT15Q8N3T1 639 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 LRIG1Q96JA1 1093 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 HEXIM2Q96MH2 286 aaKnown RBP23.77■■□□□ 1.4
PVT1-218ENST00000523328 ARID3AQ99856 593 aa23.77■■□□□ 1.4
PVT1-218ENST00000523328 TNFSF14O43557 240 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 CALUO43852 315 aaPredicted RBP23.76■■□□□ 1.39
PVT1-218ENST00000523328 TEAD4Q15561 434 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 LAYNQ6UX15 382 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 INTS8Q75QN2 995 aaKnown RBP23.76■■□□□ 1.39
PVT1-218ENST00000523328 BHLHA9Q7RTU4 235 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 ZNF366Q8N895 744 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 SLC4A11Q8NBS3 891 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 CYB5D2Q8WUJ1 264 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 BIRC7Q96CA5 298 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 DNAI2Q9GZS0 605 aa23.76■■□□□ 1.39
PVT1-218ENST00000523328 PLXNA2O75051 1894 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 BPTFQ12830 3046 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 FAM149AA5PLN7 773 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 KCNK3O14649 394 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 PCDHGA12O60330 932 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 NR2F2P24468 414 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 PDE4CQ08493 712 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 SMAD1Q15797 465 aaKnown RBP23.75■■□□□ 1.39
PVT1-218ENST00000523328 NFIL3Q16649 462 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 FNDC3BQ53EP0 1204 aaKnown RBP23.75■■□□□ 1.39
PVT1-218ENST00000523328 KCNT1Q5JUK3 1230 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 PM20D1Q6GTS8 502 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 KIAA0907Q7Z7F0 614 aaPredicted RBP23.75■■□□□ 1.39
PVT1-218ENST00000523328 ADIPOR2Q86V24 386 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 IGSF8Q969P0 613 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 MMRN2Q9H8L6 949 aa23.75■■□□□ 1.39
PVT1-218ENST00000523328 TSPAN3O60637 253 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 SEMA4FO95754 770 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 GRK6P43250 576 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 CCT8P50990 548 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 TKTL1P51854 596 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 RAD23BP54727 409 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 ENPEPQ07075 957 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms