RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SMIM35A0A1B0GVV1 85 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 CACNA2D1P54289 1103 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 GJC2Q5T442 439 aaPredicted RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 DDX42Q86XP3 938 aaKnown RBP eCLIP16.61■□□□□ 0.25
USP42-207ENST00000521713 SCUBE1Q8IWY4 988 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 TRAPPC9Q96Q05 1148 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 PRDM16Q9HAZ2 1276 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 RIC8BQ9NVN3 520 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 ST3GAL5Q9UNP4 418 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 BDNFP23560 247 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 SERPINB8P50452 374 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 CCL23P55773 120 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 DNAJC3Q13217 504 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 AGAP9Q5VTM2 703 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 CRELD2Q6UXH1 353 aaPredicted RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 DEFB106AQ8N104 65 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 ATXN2LQ8WWM7 1075 aaKnown RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 ATG4AQ8WYN0 398 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 TMA16Q96EY4 203 aaKnown RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 ZFRQ96KR1 1074 aaKnown RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 HSFY1Q96LI6 401 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 PARVBQ9HBI1 364 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 CDH9Q9ULB4 789 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 PSMC3P17980 439 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 CNGA2Q16280 664 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 TRAF7Q6Q0C0 670 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 GALNT4Q8N4A0 578 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 ACTL9Q8TC94 416 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 APOL5Q9BWW9 433 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 KLHL4Q9C0H6 718 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 LACRTQ9GZZ8 138 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 DDX20Q9UHI6 824 aaKnown RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 PHLPP1O60346 1717 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 RASSF9O75901 435 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 MAP3K6O95382 1288 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 ILF2Q12905 390 aaKnown RBP16.61■□□□□ 0.25
USP42-207ENST00000521713 SLAIN1Q8ND83 568 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 DNAJC19Q96DA6 116 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 CAAP1Q9H8G2 361 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 NT5MQ9NPB1 228 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 SMPD4Q9NXE4 827 aa16.61■□□□□ 0.25
USP42-207ENST00000521713 ATP6V1B1P15313 513 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 CLK1P49759 484 aaKnown RBP16.6■□□□□ 0.25
USP42-207ENST00000521713 STX5Q13190 355 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 SPDYCQ5MJ68 293 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 OTUB1Q96FW1 271 aaPredicted RBP16.6■□□□□ 0.25
USP42-207ENST00000521713 SIKE1Q9BRV8 207 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 SLC9A3R1O14745 358 aaPredicted RBP16.6■□□□□ 0.25
USP42-207ENST00000521713 DGKZQ13574 1117 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 CES5AQ6NT32 575 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 C18orf25Q96B23 403 aaPredicted RBP16.6■□□□□ 0.25
USP42-207ENST00000521713 ADAM33Q9BZ11 813 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 CLPBQ9H078 707 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 ATP13A1Q9HD20 1204 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 PRR23AA6NEV1 266 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 GOLGA8TH3BQL2 631 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 CLASP2O75122 1294 aaKnown RBP16.6■□□□□ 0.25
USP42-207ENST00000521713 PARNO95453 639 aaKnown RBP16.6■□□□□ 0.25
USP42-207ENST00000521713 HLA-DPA1P20036 260 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 CYP2C18P33260 490 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 TUBP50607 506 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 RRM2BQ7LG56 351 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 EIF1ADQ8N9N8 165 aaKnown RBP16.6■□□□□ 0.25
USP42-207ENST00000521713 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■■■■□ 23.4
USP42-207ENST00000521713 RUBCNLQ9H714 662 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 DIABLOQ9NR28 239 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 UBOX5O94941 541 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 OR1E1P30953 314 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 GRM5P41594 1212 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 NR2C2P49116 596 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 ITGA7Q13683 1181 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 TNIP2Q8NFZ5 429 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 APBB2Q92870 758 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 EPS8L2Q9H6S3 715 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 HAO1Q9UJM8 370 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 DUSP10Q9Y6W6 482 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 PIK3C2AO00443 1686 aa16.6■□□□□ 0.25
USP42-207ENST00000521713 TRIM49D1C9J1S8 452 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 AIM2O14862 343 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 PJA2O43164 708 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 DUSP11O75319 330 aaKnown RBP16.59■□□□□ 0.25
USP42-207ENST00000521713 ALBP02768 609 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 CD52P31358 61 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 ITGB3BPQ13352 177 aaPredicted RBP16.59■□□□□ 0.25
USP42-207ENST00000521713 MTM1Q13496 603 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 SPDYE7PQ495Y7 208 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 CBWD6Q4V339 395 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 CBWD3Q5JTY5 395 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 CBWD5Q5RIA9 395 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 WSCD1Q658N2 575 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 NECAB2Q7Z6G3 386 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 STMN3Q9NZ72 180 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 HEY2Q9UBP5 337 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 KANSL1LA0AUZ9 987 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 H2AFYO75367 372 aaKnown RBP16.59■□□□□ 0.25
USP42-207ENST00000521713 ACADMP11310 421 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms