RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 TSPAN3O60637 253 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 TBXAS1P24557 533 aaPredicted RBP16.59■□□□□ 0.25
VPS37A-204ENST00000519381 TPMTP51580 245 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 CUL2Q13617 745 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 TRIP6Q15654 476 aaKnown RBP16.59■□□□□ 0.25
VPS37A-204ENST00000519381 ZCWPW2Q504Y3 356 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 RAB41Q5JT25 222 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 DCAF12L1Q5VU92 463 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 FAM124AQ86V42 546 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 WFIKKN2Q8TEU8 576 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 GATA6Q92908 595 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 MKRN2Q9H000 416 aaKnown RBP16.59■□□□□ 0.25
VPS37A-204ENST00000519381 GOLPH3LQ9H4A5 285 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 ITM2CQ9NQX7 267 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 USP36Q9P275 1121 aaKnown RBP16.59■□□□□ 0.25
VPS37A-204ENST00000519381 HOOK1Q9UJC3 728 aaKnown RBP16.59■□□□□ 0.25
VPS37A-204ENST00000519381 WASF3Q9UPY6 502 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 HBS1LQ9Y450 684 aaKnown RBP16.59■□□□□ 0.25
VPS37A-204ENST00000519381 NFE2L3Q9Y4A8 694 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 IGF2RP11717 2491 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 ZFHX4Q86UP3 3567 aa16.59■□□□□ 0.25
VPS37A-204ENST00000519381 CHD6Q8TD26 2715 aa16.58■□□□□ 0.25
VPS37A-204ENST00000519381 TYW5A2RUC4 315 aaKnown RBP16.58■□□□□ 0.24
VPS37A-204ENST00000519381 BCAT2O15382 392 aaPredicted RBP16.58■□□□□ 0.24
VPS37A-204ENST00000519381 SH3BP5O60239 455 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 SMC2O95347 1197 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 SETSIPP0DME0 302 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 CD59P13987 128 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 MATKP42679 507 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 PDE4CQ08493 712 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 STIM1Q13586 685 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 CCDC117Q8IWD4 279 aaPredicted RBP16.58■□□□□ 0.24
VPS37A-204ENST00000519381 CHCHD4Q8N4Q1 142 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 SETD7Q8WTS6 366 aaKnown RBP16.58■□□□□ 0.24
VPS37A-204ENST00000519381 SORCS1Q8WY21 1168 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 EDEM1Q92611 657 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 PIWIL1Q96J94 861 aaKnown RBP16.58■□□□□ 0.24
VPS37A-204ENST00000519381 LHX5Q9H2C1 402 aa16.58■□□□□ 0.24
VPS37A-204ENST00000519381 ARMCX3Q9UH62 379 aaPredicted RBP16.58■□□□□ 0.24
VPS37A-204ENST00000519381 APOBEC2Q9Y235 224 aaKnown RBP16.58■□□□□ 0.24
VPS37A-204ENST00000519381 FAM208BQ5VWN6 2430 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 PCNX2A6NKB5 2137 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 VDRP11473 427 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 LCP1P13796 627 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 PRKCHP24723 683 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 FKBP3Q00688 224 aaKnown RBP16.57■□□□□ 0.24
VPS37A-204ENST00000519381 LRMPQ12912 555 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 PNOCQ13519 176 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 TRIP4Q15650 581 aaPredicted RBP16.57■□□□□ 0.24
VPS37A-204ENST00000519381 CBWD6Q4V339 395 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 CBWD3Q5JTY5 395 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 CBWD5Q5RIA9 395 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 PM20D1Q6GTS8 502 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 CHST9Q7L1S5 443 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 OR2T3Q8NH03 318 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 TATDN2Q93075 761 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
VPS37A-204ENST00000519381 CAMK1GQ96NX5 476 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 GTPBP4Q9BZE4 634 aaKnown RBP16.57■□□□□ 0.24
VPS37A-204ENST00000519381 FBRSQ9HAH7 460 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 ABCC13Q9NSE7 274 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 SFMBT1Q9UHJ3 866 aa16.57■□□□□ 0.24
VPS37A-204ENST00000519381 RALYQ9UKM9 306 aaKnown RBP16.57■□□□□ 0.24
VPS37A-204ENST00000519381 LATS1O95835 1130 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 DNTTP04053 509 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 ATP5BP06576 529 aaKnown RBP16.56■□□□□ 0.24
VPS37A-204ENST00000519381 HOXD9P28356 352 aaPredicted RBP16.56■□□□□ 0.24
VPS37A-204ENST00000519381 SLC11A2P49281 568 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 FAM193AP78312 1265 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 CETN1Q12798 172 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 ENPP2Q13822 863 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 TEAD4Q15561 434 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 TTC31Q49AM3 519 aaPredicted RBP16.56■□□□□ 0.24
VPS37A-204ENST00000519381 ZNF658Q5TYW1 1059 aaPredicted RBP16.56■□□□□ 0.24
VPS37A-204ENST00000519381 BSPRYQ5W0U4 402 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 AHI1Q8N157 1196 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 ZNF557Q8N988 423 aaPredicted RBP16.56■□□□□ 0.24
VPS37A-204ENST00000519381 UBA3Q8TBC4 463 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 DNASE2BQ8WZ79 361 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 NDRG1Q92597 394 aaKnown RBP16.56■□□□□ 0.24
VPS37A-204ENST00000519381 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 GAREM1Q9H706 876 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 GDPD2Q9HCC8 539 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 ABCB8Q9NUT2 735 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 EIF2B4Q9UI10 523 aaKnown RBP16.56■□□□□ 0.24
VPS37A-204ENST00000519381 GGA2Q9UJY4 613 aa16.56■□□□□ 0.24
VPS37A-204ENST00000519381 SRRM3A6NNA2 597 aaPredicted RBP16.55■□□□□ 0.24
VPS37A-204ENST00000519381 METTL12A8MUP2 240 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 KCNJ18B7U540 433 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 M0QYV0 167 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 TULP2O00295 520 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 MSI1O43347 362 aaKnown RBP16.55■□□□□ 0.24
VPS37A-204ENST00000519381 FTH1P19P0C7X4 201 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 PABPC1P11940 636 aaKnown RBP16.55■□□□□ 0.24
VPS37A-204ENST00000519381 HLA-EP13747 358 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 PRCPP42785 496 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 COPAP53621 1224 aa16.55■□□□□ 0.24
VPS37A-204ENST00000519381 ST8SIA6P61647 398 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms