RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 RDXP35241 583 aaKnown RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 FNTBP49356 437 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 JAK3P52333 1124 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 SATB1Q01826 763 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 GRIN1Q05586 938 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 ELAVL2Q12926 359 aaKnown RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 SF3A2Q15428 464 aaKnown RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 LONRF3Q496Y0 759 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 DGKKQ5KSL6 1271 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 CPZQ66K79 652 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 ZCCHC8Q6NZY4 707 aaKnown RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 SRGAP1Q7Z6B7 1085 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 PTRH1Q86Y79 214 aaKnown RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 IGSF22Q8N9C0 903 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 RDM1Q8NG50 284 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 NINJ1Q92982 152 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 ZNF668Q96K58 619 aaPredicted RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 NLRP4Q96MN2 994 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 FDXACB1Q9BRP7 624 aaPredicted RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 ARRDC1-AS1Q9H2J1 176 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 C8orf33Q9H7E9 229 aaPredicted RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 PLAAQ9Y263 795 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 GIT1Q9Y2X7 761 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 NEUROG3Q9Y4Z2 214 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 TNPO3Q9Y5L0 923 aaKnown RBP6.74□□□□□ -1.33
CCDC6-203ENST00000518638 PIAS3Q9Y6X2 628 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 SPAG17Q6Q759 2223 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 COL4A3Q01955 1670 aa6.74□□□□□ -1.33
CCDC6-203ENST00000518638 IGLV3-22A0A075B6J6 115 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 IGKV6-21A0A0C4DH24 114 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 FAM86B1E9PN63 330 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 B4GALT3O60512 393 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 TADA2AO75478 443 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 CSDE1O75534 798 aaKnown RBP6.73□□□□□ -1.33
CCDC6-203ENST00000518638 RPP40O75818 363 aaKnown RBP6.73□□□□□ -1.33
CCDC6-203ENST00000518638 ERLIN2O94905 339 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 ITGB3P05106 788 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 FAM86B2P0C5J1 330 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 CCDC192P0DO97 292 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 MYBP10242 640 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 CHRNB1P11230 501 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 PSMC3P17980 439 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 KRT15P19012 456 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 MPLP40238 635 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 ITGA1P56199 1179 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 GRIK3Q13003 919 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 ZNF460Q14592 562 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 KARSQ15046 597 aaKnown RBP6.73□□□□□ -1.33
CCDC6-203ENST00000518638 ELF2Q15723 593 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 VWA3BQ502W6 1294 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 TMEM177Q53S58 311 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 XKR3Q5GH77 459 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 NOTUMQ6P988 496 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 LIPIQ6XZB0 460 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 TAS1R1Q7RTX1 841 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 RHPN2Q8IUC4 686 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 SRBD1Q8N5C6 995 aaKnown RBP6.73□□□□□ -1.33
CCDC6-203ENST00000518638 ITFG1Q8TB96 612 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 CSGALNACT1Q8TDX6 532 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 GAB3Q8WWW8 586 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 E2F7Q96AV8 911 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 SPATA25Q9BR10 227 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 TTPALQ9BTX7 342 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 EDEM2Q9BV94 578 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 TRIM6Q9C030 488 aaPredicted RBP6.73□□□□□ -1.33
CCDC6-203ENST00000518638 RBM28Q9NW13 759 aaKnown RBP6.73□□□□□ -1.33
CCDC6-203ENST00000518638 TICRRQ7Z2Z1 1910 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 COL4A2P08572 1712 aa6.73□□□□□ -1.33
CCDC6-203ENST00000518638 ARL5CA6NH57 179 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 E7EWF7 191 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 H0Y626 953 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 K7ESF4 209 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 ZNF263O14978 683 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 CCL16O15467 120 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 ASAP2O43150 1006 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 DKC1O60832 514 aaKnown RBP eCLIP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 TRIM16O95361 564 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 PLEKHA8P1O95397 391 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 RHOP08100 348 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 GJA4P35212 333 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 MLH1P40692 756 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 LIFRP42702 1097 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 NTHL1P78549 312 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 PSMD5Q16401 504 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 SYNE3Q6ZMZ3 975 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 TMTC3Q6ZXV5 915 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 C11orf74Q86VG3 221 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 PROSER1Q86XN7 944 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 FMNL3Q8IVF7 1028 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 NOSTRINQ8IVI9 506 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 KYQ8NBH2 561 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 LEMD2Q8NC56 503 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 CCDC12Q8WUD4 166 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 RUFY2Q8WXA3 655 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 PSPC1Q8WXF1 523 aaKnown RBP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 ZBTB8AQ96BR9 441 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 ZC3H10Q96K80 434 aaKnown RBP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 RIT2Q99578 217 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms